myRT

myRT report for GCA_007113665.1_ASM711366v1

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Seq: CP041607.1 Streptomyces sp. S1D4-14 chromosome, complete genome (11723487 bp)
Overview 1 RT 1: 430427-435096 bp 2 RT 2: 1269229-1273811 bp 3 RT 3: 1509747-1517944 bp 4 RT 4: 9258868-9262447 bp Neighborhood of RT #1 [430427, 435107] MhpC RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #2 [1269229, 1273811] RVT-GII GIIM COG3464 COG3464 Neighborhood of RT #3 [1509747, 1517988] SpoIIE RimI RVT-GII Resolvase Recombinase Zn_ribbon_recom COG3905 RVT-GII GIIM DUF4259 UDG_F5_TTUDGB_like Neighborhood of RT #4 [9258868, 9262449] COG3293 COG3293 RVT-GII DUF772 Feature: gene Location: 430427-430902 bp Feature: domain Description: MhpC Location: 430601-430799 bp Feature: domain Description: MhpC Location: 430601 -430799 bp Feature: gene Location: 430909-431035 bp Feature: gene Location: 431507-432982 bp Ori: QDN64815.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431849-432545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 849-432545 bp Feature: domain Description: GIIM Note: maturase Location: 432620-432839 bp Feature: domain Description: GIIM Note: maturase Location: 432620-432839 bp Feature: gene Location: 433165-433392 bp Feature: gene Location: 433578-435107 bp Ori: QDN73267.1 Feature: domain Description: COG3464 Location: 433584-434229 bp Feature: domain Description: COG3464 Location: 433584-434229 bp Feature: domain Description: COG3464 Location: 434751-435096 bp Feature: domain Description: COG3464 Location: 434751 -435096 bp Feature: gene Location: 1269229-1269564 bp Feature: gene Location: 1269673-1269799 bp Feature: gene Location: 1270271-1271746 bp Ori: QDN65442.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1270613-1271309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27061 3-1 271 309 bp Feature: domain Description: GIIM Note: maturase Location: 1271384-1271603 bp Feature: domain Description: GIIM Note: maturase Location: 1 271 384-1 271 603 bp Feature: gene Location: 1271869-1273398 bp Ori: QDN73341.1 Feature: domain Description: COG3464 Location: 1271875-1272520 bp Feature: domain Description: COG3464 Location: 1 271 875-1 272520 bp Feature: domain Description: COG3464 Location: 1273042-1273387 bp Feature: domain Description: COG3464 Location: 1 273042-1 273387 bp Feature: gene Location: 1273584-1273811 bp Feature: gene Location: 1509747-1510988 bp Ori: QDN65606.1 Feature: domain Description: SpoIIE Location: 1510380-1510950 bp Feature: domain Description: SpoIIE Location: 1 51 0380-1 51 0950 bp Feature: gene Location: 1511487-1512008 bp Ori: QDN65607.1 Feature: domain Description: RimI Location: 1511526-1511922 bp Feature: domain Description: RimI Location: 1 51 1 526-1 51 1 922 bp Feature: gene Location: 1512795-1513510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513119-1513308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 31 1 9-1 51 3308 bp Feature: gene Location: 1513490-1515160 bp Feature: domain Description: Resolvase Location: 1513502-1513940 bp Feature: domain Description: Resolvase Location: 1 51 3502-1 51 3940 bp Feature: domain Description: Recombinase Location: 1514030-1514393 bp Feature: domain Description: Recombinase Location: 1 51 4030-1 51 4393 bp Feature: domain Description: Zn_ribbon_recom Location: 1514432-1514624 bp Feature: domain Description: Zn_ribbon_recom Location: 1 51 4432-1 51 4624 bp Feature: gene Location: 1515293-1515640 bp Ori: QDN65608.1 Feature: domain Description: COG3905 Location: 1515494-1515611 bp Feature: domain Description: COG3905 Location: 1 51 5494-1 51 561 1 bp Feature: gene Location: 1515749-1516495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1515752-1516064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 5752-1 51 6064 bp Feature: domain Description: GIIM Note: maturase Location: 1516136-1516355 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 61 36-1 51 6355 bp Feature: gene Location: 1516625-1517057 bp Feature: domain Description: DUF4259 Location: 1516631-1516751 bp Feature: domain Description: DUF4259 Location: 1 51 6631 -1 51 6751 bp Feature: gene Location: 1517206-1517988 bp Ori: QDN65609.1 Feature: domain Description: UDG_F5_TTUDGB_like Location: 1517308-1517944 bp Feature: domain Description: UDG_F5_TTUDGB_like Location: 1 51 7308-1 51 7944 bp Feature: gene Location: 9258868-9259698 bp Feature: domain Description: COG3293 Location: 9258889-9259234 bp Feature: domain Description: COG3293 Location: 9258889-9259234 bp Feature: domain Description: COG3293 Location: 9259285-9259657 bp Feature: domain Description: COG3293 Location: 9259285-9259657 bp Feature: gene Location: 9259695-9260009 bp Feature: gene Location: 9260137-9261556 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9260458-9261142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9260458-9261 1 42 bp Feature: gene Location: 9261598-9261841 bp Feature: gene Location: 9262162-9262449 bp Feature: domain Description: DUF772 Location: 9262330-9262447 bp Feature: domain Description: DUF772 Location: 9262330-9262447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII, GIIM (pfam08388), COG3464 (Transposase ), SpoIIE (pfam07228), RimI (COG0456), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3905 (Predicted transcriptional regulator )
DUF4259 (pfam14078), UDG_F5_TTUDGB_like, COG3293 (Transposase ), DUF772 (pfam05598)