myRT

myRT report for GCA_007197795.1_ASM719779v1

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Seq: CP041632.1 Geobacillus sp. E263 chromosome, complete genome (3477599 bp)
Overview 1 RT 1: 493102-498081 bp 2 RT 2: 1688934-1693872 bp 3 RT 3: 1699205-1702402 bp 4 RT 4: 2215954-2221798 bp 5 RT 5: 2917628-2927060 bp Neighborhood of RT #1 [493102, 498104] smpB RVT-GII group_II_RT_mat LysM 3D KatE Neighborhood of RT #2 [1688934, 1694081] DsbD_2 SHOCT RVT-GII GIIM DDE_Tnp_1 COG4584 Neighborhood of RT #3 [1699205, 1702458] RVT-GII GIIM CuRO_D2_2dMcoN_like CuRO_D2_2dMcoN_like CuRO_D2_2dMcoN_like Neighborhood of RT #4 [2215954, 2221812] RNase_Y recA RVT-GII HNHc recA Neighborhood of RT #5 [2917628, 2927065] PRK12389 gltB RVT-GII GIIM YgaE DppC Feature: gene Location: 493102-493569 bp Feature: domain Description: smpB Location: 493120-493555 bp Feature: domain Description: smpB Location: 4931 20-493555 bp Feature: gene Location: 494181-494369 bp Feature: gene Location: 494722-495465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494785-494986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494785-494986 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 495004-495265 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 495004-495265 bp Feature: gene Location: 495758-496321 bp Feature: domain Description: LysM Location: 495839-495965 bp Feature: domain Description: LysM Location: 495839-495965 bp Feature: domain Description: 3D Location: 496001-496313 bp Feature: domain Description: 3D Location: 496001 -49631 3 bp Feature: gene Location: 496638-498104 bp Feature: domain Description: KatE Location: 496647-498081 bp Feature: domain Description: KatE Location: 496647-498081 bp Feature: gene Location: 1688934-1689677 bp Feature: domain Description: DsbD_2 Location: 1689036-1689654 bp Feature: domain Description: DsbD_2 Location: 1 689036-1 689654 bp Feature: gene Location: 1689704-1689901 bp Feature: domain Description: SHOCT Location: 1689824-1689899 bp Feature: domain Description: SHOCT Location: 1 689824-1 689899 bp Feature: gene Location: 1690448-1691836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1690772-1691390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 690772-1 691 390 bp Feature: domain Description: GIIM Note: maturase Location: 1691438-1691651 bp Feature: domain Description: GIIM Note: maturase Location: 1 691 438-1 691 651 bp Feature: gene Location: 1692019-1693200 bp Feature: domain Description: DDE_Tnp_1 Location: 1692439-1693051 bp Feature: domain Description: DDE_Tnp_1 Location: 1 692439-1 693051 bp Feature: gene Location: 1693314-1694081 bp Feature: domain Description: COG4584 Location: 1693431-1693872 bp Feature: domain Description: COG4584 Location: 1 693431 -1 693872 bp Feature: gene Location: 1699205-1699342 bp Feature: gene Location: 1699408-1699545 bp Feature: gene Location: 1699536-1700564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1699734-1700352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 699734-1 700352 bp Feature: domain Description: GIIM Note: maturase Location: 1700400-1700562 bp Feature: domain Description: GIIM Note: maturase Location: 1 700400-1 700562 bp Feature: gene Location: 1700574-1700795 bp Feature: gene Location: 1700872-1702458 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1701106-1701379 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1 701 1 06-1 701 379 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1701442-1701922 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1 701 442-1 701 922 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1702057-1702402 bp Feature: domain Description: CuRO_D2_2dMcoN_like Location: 1 702057-1 702402 bp Feature: gene Location: 2215954-2217510 bp Feature: domain Description: RNase_Y Location: 2215972-2217508 bp Feature: domain Description: RNase_Y Location: 221 5972-221 7508 bp Feature: gene Location: 2217971-2218861 bp Feature: domain Description: recA Location: 2218100-2218835 bp Feature: domain Description: recA Location: 221 81 00-221 8835 bp Feature: gene Location: 2218866-2220683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2219121-2219832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 91 21 -221 9832 bp Feature: domain Description: HNHc Note: nucleases Location: 2220429-2220594 bp Feature: domain Description: HNHc Note: nucleases Location: 2220429-2220594 bp Feature: gene Location: 2220972-2221178 bp Feature: gene Location: 2221507-2221812 bp Feature: domain Description: recA Location: 2221513-2221798 bp Feature: domain Description: recA Location: 2221 51 3-2221 798 bp Feature: gene Location: 2917628-2918923 bp Feature: domain Description: PRK12389 Location: 2917631-2918912 bp Feature: domain Description: PRK1 2389 Location: 291 7631 -291 891 2 bp Feature: gene Location: 2919128-2923645 bp Feature: domain Description: gltB Location: 2919221-2923397 bp Feature: domain Description: gltB Location: 291 9221 -2923397 bp Feature: gene Location: 2923719-2924819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2923782-2924376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2923782-2924376 bp Feature: domain Description: GIIM Note: maturase Location: 2924424-2924637 bp Feature: domain Description: GIIM Note: maturase Location: 2924424-2924637 bp Feature: gene Location: 2925028-2926128 bp Feature: domain Description: YgaE Location: 2925061-2925988 bp Feature: domain Description: YgaE Location: 2925061 -2925988 bp Feature: gene Location: 2926166-2927065 bp Feature: domain Description: DppC Location: 2926238-2927060 bp Feature: domain Description: DppC Location: 2926238-2927060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT smpB (TIGR00086), RVT-GII, group_II_RT_mat (TIGR04416), LysM (smart00257), 3D (pfam06725), KatE (COG0753), DsbD_2 (pfam13386), SHOCT (pfam09851), GIIM (pfam08388), DDE_Tnp_1 (pfam01609)
COG4584 (Transposase ), CuRO_D2_2dMcoN_like (cd04202), RNase_Y (TIGR03319), recA (PRK09519), HNHc (smart00507), PRK12389 (glutamate-1-semialdehyde aminotransferase; Provisional), gltB (PRK11750), YgaE (COG4129), DppC (COG1173)