myRT

myRT report for GCA_007556815.1_ASM755681v1

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Seq: CP041744.1 Paraburkholderia megapolitana strain LMG 23650 plasmid unnamed1, complete sequence (125785 bp)
Overview 1 RT 1: 2402-6004 bp Neighborhood of RT #1 [2402, 6004] MhpC Tas RVT-GII PHA02517 Feature: gene Location: 2402-3016 bp Ori: QDQ82173.1 Feature: domain Description: MhpC Location: 2417-2993 bp Feature: domain Description: MhpC Location: 241 7-2993 bp Feature: gene Location: 3141-4138 bp Feature: domain Description: Tas Location: 3153-3645 bp Feature: domain Description: Tas Location: 31 53-3645 bp Feature: gene Location: 4185-5065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4191-4518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 91 -451 8 bp Feature: gene Location: 5144-5638 bp Feature: domain Description: PHA02517 Location: 5147-5615 bp Feature: domain Description: PHA0251 7 Location: 51 47-561 5 bp Feature: gene Location: 5630-6004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), Tas (COG0667), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP041743.1 Paraburkholderia megapolitana strain LMG 23650 chromosome 1, complete sequence (3016794 bp)
Overview 1 RT 1: 245918-252546 bp Neighborhood of RT #1 [245918, 253910] PRK14996 TetR_C_33 NnrU RVT-Retrons Beta-lactamase Haemagg_act Haemagg_act Feature: gene Location: 245918-246703 bp Ori: QDQ81955.1 Feature: domain Description: PRK14996 Location: 246071-246278 bp Feature: domain Description: PRK14996 Location: 2 46071-2 462 78 bp Feature: domain Description: TetR_C_33 Location: 246329-246602 bp Feature: domain Description: TetR_C_33 Location: 2 4632 9-2 46602 bp Feature: gene Location: 246716-247291 bp Ori: QDQ79870.1 Feature: domain Description: NnrU Location: 246725-247283 bp Feature: domain Description: NnrU Location: 2 4672 5-2 472 83 bp Feature: gene Location: 247410-248774 bp Ori: QDQ79871.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 247875-248511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 47875-2 48511 bp Feature: gene Location: 248983-250161 bp Ori: QDQ79872.1 Feature: domain Description: Beta-lactamase Location: 249052-250126 bp Feature: domain Description: Beta-lactamase Location: 2 49052 -2 5012 6 bp Feature: gene Location: 250737-253910 bp Ori: QDQ79873.1 Feature: domain Description: Haemagg_act Location: 250872-251262 bp Feature: domain Description: Haemagg_act Location: 2 50872 -2 512 62 bp Feature: domain Description: Haemagg_act Location: 252174-252546 bp Feature: domain Description: Haemagg_act Location: 2 52 174-2 52 546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14996 (TetR family transcriptional regulator; Provisional), TetR_C_33, NnrU (pfam07298), RVT-Retrons, Beta-lactamase (pfam00144), Haemagg_act (smart00912)