myRT

myRT report for GCA_007559085.1_ASM755908v1

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Seq: CP041771.1 Pseudomonas aeruginosa strain A681 chromosome, complete genome (6616247 bp)
Overview 1 RT 1: 1073743-1080553 bp 2 RT 2: 4660355-4667764 bp 3 RT 3: 5583566-5587321 bp Neighborhood of RT #1 [1073743, 1080750] ABC_phnC DUF772 RVT-GII GIIM CHD CHD Neighborhood of RT #2 [4660355, 4667764] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0387 SF2_C_SNF Neighborhood of RT #3 [5583566, 5587335] RVT-Retrons VapI Feature: gene Location: 1073743-1074570 bp Ori: QDR06914.1 Gene: phnC Feature: domain Description: ABC_phnC Location: 1073773-1074487 bp Feature: domain Description: ABC_phnC Location: 1 073773-1 074487 bp Feature: gene Location: 1074913-1075423 bp Feature: domain Description: DUF772 Location: 1075063-1075258 bp Feature: domain Description: DUF772 Location: 1 075063-1 075258 bp Feature: gene Location: 1075943-1077211 bp Ori: QDR06915.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076156-1076813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0761 56-1 07681 3 bp Feature: domain Description: GIIM Note: maturase Location: 1076891-1077113 bp Feature: domain Description: GIIM Note: maturase Location: 1 076891 -1 0771 1 3 bp Feature: gene Location: 1077361-1077687 bp Feature: gene Location: 1079206-1080750 bp Ori: QDR06916.1 Feature: domain Description: CHD Location: 1079422-1079836 bp Feature: domain Description: CHD Location: 1 079422-1 079836 bp Feature: domain Description: CHD Location: 1080064-1080553 bp Feature: domain Description: CHD Location: 1 080064-1 080553 bp Feature: gene Location: 4660355-4661806 bp Ori: QDR10160.1 Feature: domain Description: AdoMet_MTases Location: 4660478-4660844 bp Feature: domain Description: AdoMet_MTases Location: 4660478-4660844 bp Feature: gene Location: 4661905-4662915 bp Feature: domain Description: DEXHc_Snf Location: 4662103-4662349 bp Feature: domain Description: DEXHc_Snf Location: 46621 03-4662349 bp Feature: gene Location: 4663533-4665251 bp Ori: QDR10161.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4663590-4663827 bp Feature: domain Description: RVT_N Location: 4663590-4663827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663878-4664529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663878-4664529 bp Feature: domain Description: GIIM Note: maturase Location: 4664583-4664814 bp Feature: domain Description: GIIM Note: maturase Location: 4664583-466481 4 bp Feature: domain Description: HNHc Note: nucleases Location: 4665048-4665204 bp Feature: domain Description: HNHc Note: nucleases Location: 4665048-4665204 bp Feature: gene Location: 4665334-4666578 bp Feature: domain Description: KOG0387 Location: 4665358-4665484 bp Feature: domain Description: KOG0387 Location: 4665358-4665484 bp Feature: domain Description: SF2_C_SNF Location: 4666036-4666414 bp Feature: domain Description: SF2_C_SNF Location: 4666036-466641 4 bp Feature: gene Location: 4666610-4667764 bp Feature: gene Location: 5583566-5583835 bp Feature: gene Location: 5583891-5584226 bp Feature: gene Location: 5584574-5585539 bp Ori: QDR11027.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5584685-5585279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5584685-5585279 bp Feature: gene Location: 5585536-5586474 bp Feature: gene Location: 5587030-5587335 bp Ori: QDR11029.1 Feature: domain Description: VapI Location: 5587042-5587321 bp Feature: domain Description: VapI Location: 5587042-5587321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388), CHD (cd07302), AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), RVT_N (pfam13655), HNHc (smart00507), KOG0387 (KOG0387, Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) )
SF2_C_SNF (cd18793), RVT-Retrons, VapI (COG3093)