myRT

myRT report for GCA_007641255.1_ASM764125v1

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Seq: CP036259.1 Sporomusa termitida strain DSM 4440 chromosome, complete genome (5184890 bp)
Overview 1 RT 1: 136804-142261 bp 2 RT 2: 892067-896243 bp 3 RT 3: 919655-924490 bp 4 RT 4: 992681-998257 bp 5 RT 5: 1226406-1233921 bp Neighborhood of RT #1 [136804, 142261] MntH RVT-GII GIIM PBP2_Bug_TTT Neighborhood of RT #2 [892067, 896243] NADH_nitroreductase Dabb RVT-GII RVT-GII GIIM YeaQ Neighborhood of RT #3 [919655, 924522] PHA02517 InsE RVT-GII PucR CdaR M20_Acy1_IAAspH Neighborhood of RT #4 [992681, 998328] RVT-UG14 Phage_int_SAM_3 INT_ICEBs1_C_like Neighborhood of RT #5 [1226406, 1233974] PRK09302 YliI RVT-GII RVT-GII GIIM CxxCxxCC ThiT Feature: gene Location: 136804-137307 bp Feature: gene Location: 137341-138837 bp Ori: QDR78897.1 Feature: domain Description: MntH Location: 137467-138820 bp Feature: domain Description: MntH Location: 1 37467-1 38820 bp Feature: gene Location: 139396-140631 bp Ori: QDR78898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139588-140245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39588-1 40245 bp Feature: domain Description: GIIM Note: maturase Location: 140326-140542 bp Feature: domain Description: GIIM Note: maturase Location: 1 40326-1 40542 bp Feature: gene Location: 140958-141707 bp Ori: QDR78899.1 Feature: domain Description: PBP2_Bug_TTT Location: 141078-141666 bp Feature: domain Description: PBP2_Bug_TTT Location: 1 41 078-1 41 666 bp Feature: gene Location: 141851-142261 bp Feature: gene Location: 892067-892564 bp Ori: QDR79525.1 Feature: domain Description: NADH_nitroreductase Location: 892073-892559 bp Feature: domain Description: NADH_nitroreductase Location: 892073-892559 bp Feature: gene Location: 892658-892945 bp Ori: QDR79526.1 Feature: domain Description: Dabb Location: 892679-892931 bp Feature: domain Description: Dabb Location: 892679-892931 bp Feature: gene Location: 893574-894164 bp Ori: QDR79527.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893778-894144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893778-8941 44 bp Feature: gene Location: 894124-894822 bp Ori: QDR79528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894133-894436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8941 33-894436 bp Feature: domain Description: GIIM Note: maturase Location: 894517-894733 bp Feature: domain Description: GIIM Note: maturase Location: 89451 7-894733 bp Feature: gene Location: 895020-895247 bp Ori: QDR79529.1 Feature: domain Description: YeaQ Location: 895023-895242 bp Feature: domain Description: YeaQ Location: 895023-895242 bp Feature: gene Location: 895290-896243 bp Feature: gene Location: 919655-920458 bp Ori: QDR79551.1 Feature: domain Description: PHA02517 Location: 919661-920432 bp Feature: domain Description: PHA0251 7 Location: 91 9661 -920432 bp Feature: gene Location: 920518-920805 bp Ori: QDR79552.1 Feature: domain Description: InsE Location: 920527-920797 bp Feature: domain Description: InsE Location: 920527-920797 bp Feature: gene Location: 920922-921377 bp Ori: QDR79553.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921126-921318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 1 26-921 31 8 bp Feature: gene Location: 921378-922955 bp Ori: QDR79554.1 Gene: pucR_1 Feature: domain Description: PucR Location: 921408-921762 bp Feature: domain Description: PucR Location: 921 408-921 762 bp Feature: domain Description: CdaR Location: 922386-922941 bp Feature: domain Description: CdaR Location: 922386-922941 bp Feature: gene Location: 923200-924522 bp Ori: QDR79555.1 Gene: iaaH_1 Feature: domain Description: M20_Acy1_IAAspH Location: 923257-924490 bp Feature: domain Description: M20_Acy1 _IAAspH Location: 923257-924490 bp Feature: gene Location: 992681-993139 bp Feature: gene Location: 993126-993905 bp Feature: gene Location: 994133-995740 bp Ori: QDR79626.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 994484-994841 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 994484-994841 bp Feature: gene Location: 996064-996303 bp Feature: gene Location: 997204-998328 bp Ori: QDR79628.1 Gene: xerC_1 Feature: domain Description: Phage_int_SAM_3 Location: 997399-997552 bp Feature: domain Description: Phage_int_SAM_3 Location: 997399-997552 bp Feature: domain Description: INT_ICEBs1_C_like Location: 997762-998257 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 997762-998257 bp Feature: gene Location: 1226406-1228100 bp Ori: QDR79809.1 Gene: kaiC Feature: domain Description: PRK09302 Location: 1226415-1227924 bp Feature: domain Description: PRK09302 Location: 1 22641 5-1 227924 bp Feature: gene Location: 1228255-1229385 bp Ori: QDR79810.1 Feature: domain Description: YliI Location: 1228330-1229368 bp Feature: domain Description: YliI Location: 1 228330-1 229368 bp Feature: gene Location: 1230347-1230937 bp Ori: QDR79811.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1230551-1230917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 230551 -1 23091 7 bp Feature: gene Location: 1230897-1231544 bp Ori: QDR79812.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1230906-1231209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 230906-1 231 209 bp Feature: domain Description: GIIM Note: maturase Location: 1231290-1231503 bp Feature: domain Description: GIIM Note: maturase Location: 1 231 290-1 231 503 bp Feature: gene Location: 1231749-1232858 bp Ori: QDR79813.1 Feature: domain Description: CxxCxxCC Location: 1231782-1232040 bp Feature: domain Description: CxxCxxCC Location: 1 231 782-1 232040 bp Feature: gene Location: 1233312-1233974 bp Ori: QDR79814.1 Feature: domain Description: ThiT Location: 1233417-1233921 bp Feature: domain Description: ThiT Location: 1 23341 7-1 233921 bp Sorry, your browser does 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Associated domains:myRT MntH (COG1914), RVT-GII, GIIM (pfam08388), PBP2_Bug_TTT (cd07012), NADH_nitroreductase, Dabb (smart00886), YeaQ (COG2261), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), PucR (pfam07905)
CdaR (COG3835), M20_Acy1_IAAspH (cd05665), RVT-UG14, Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), PRK09302 (circadian clock protein KaiC; Reviewed), YliI (COG2133), CxxCxxCC (pfam03692), ThiT (COG3859)