myRT

myRT report for GCA_007741495.1_ASM774149v1

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Seq: CP036262.1 Planctomycetes bacterium FF011L chromosome, complete genome (7216590 bp)
Overview 1 RT 1: 1557243-1567555 bp 2 RT 2: 2565706-2571627 bp 3 RT 3: 2989346-2993434 bp 4 RT 4: 3445181-3450252 bp 5 RT 5: 5728765-5732882 bp 6 RT 6: 6074936-6080835 bp Neighborhood of RT #1 [1557243, 1567605] KOG3864 KOG3864 KOG3864 RVT-GII GIIM RVT-GII GIIM RVT-GII GIIM DUF3991 Toprim_2 Neighborhood of RT #2 [2565706, 2571627] COG3905 RVT-GII GIIM RVT-GII GIIM Neighborhood of RT #3 [2989346, 2993439] RVT-GII GIIM stabl_stabl_stabl_TIGR02574 Neighborhood of RT #4 [3445181, 3450252] PerM DUF11 DUF11 DUF11 DUF11 RVT-DGRs GIIM Neighborhood of RT #5 [5728765, 5732882] RVT-GII Neighborhood of RT #6 [6074936, 6081035] RVT-UG5 YncB Feature: gene Location: 1557243-1557677 bp Feature: gene Location: 1557822-1558748 bp Ori: QDS92493.1 Feature: domain Description: KOG3864 Location: 1558230-1558392 bp Feature: domain Description: KOG3864 Location: 1 558230-1 558392 bp Feature: domain Description: KOG3864 Location: 1558395-1558608 bp Feature: domain Description: KOG3864 Location: 1 558395-1 558608 bp Feature: domain Description: KOG3864 Location: 1558614-1558740 bp Feature: domain Description: KOG3864 Location: 1 55861 4-1 558740 bp Feature: gene Location: 1559271-1560689 bp Ori: QDS92494.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559619-1560237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55961 9-1 560237 bp Feature: domain Description: GIIM Note: maturase Location: 1560282-1560495 bp Feature: domain Description: GIIM Note: maturase Location: 1 560282-1 560495 bp Feature: gene Location: 1561287-1562705 bp Ori: QDS92495.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561635-1562253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 561 635-1 562253 bp Feature: domain Description: GIIM Note: maturase Location: 1562298-1562511 bp Feature: domain Description: GIIM Note: maturase Location: 1 562298-1 56251 1 bp Feature: gene Location: 1562871-1563209 bp Feature: gene Location: 1563842-1565281 bp Ori: QDS92497.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1564211-1564829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56421 1 -1 564829 bp Feature: domain Description: GIIM Note: maturase Location: 1564880-1565096 bp Feature: domain Description: GIIM Note: maturase Location: 1 564880-1 565096 bp Feature: gene Location: 1565359-1565904 bp Feature: gene Location: 1566634-1567605 bp Ori: QDS92499.1 Feature: domain Description: DUF3991 Location: 1567030-1567243 bp Feature: domain Description: DUF3991 Location: 1 567030-1 567243 bp Feature: domain Description: Toprim_2 Location: 1567270-1567555 bp Feature: domain Description: Toprim_2 Location: 1 567270-1 567555 bp Feature: gene Location: 2565706-2565915 bp Ori: QDS93237.1 Feature: domain Description: COG3905 Location: 2565790-2565904 bp Feature: domain Description: COG3905 Location: 2565790-2565904 bp Feature: gene Location: 2566093-2566665 bp Feature: gene Location: 2566902-2568095 bp Ori: QDS93239.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2567025-2567643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2567025-2567643 bp Feature: domain Description: GIIM Note: maturase Location: 2567694-2567907 bp Feature: domain Description: GIIM Note: maturase Location: 2567694-2567907 bp Feature: gene Location: 2568148-2568459 bp Feature: gene Location: 2569161-2570600 bp Ori: QDS93241.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2569530-2570148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2569530-25701 48 bp Feature: domain Description: GIIM Note: maturase Location: 2570199-2570415 bp Feature: domain Description: GIIM Note: maturase Location: 25701 99-257041 5 bp Feature: gene Location: 2570707-2571081 bp Feature: gene Location: 2571247-2571627 bp Feature: gene Location: 2989346-2989666 bp Feature: gene Location: 2989782-2990249 bp Feature: gene Location: 2990311-2991750 bp Ori: QDS93564.1 Gene: ltrA_6 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2990680-2991298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2990680-2991 298 bp Feature: domain Description: GIIM Note: maturase Location: 2991349-2991562 bp Feature: domain Description: GIIM Note: maturase Location: 2991 349-2991 562 bp Feature: gene Location: 2992364-2992846 bp Feature: gene Location: 2993218-2993439 bp Ori: QDS93566.1 Feature: domain Description: stabl_stabl_stabl_TIGR02574 Location: 2993254-2993434 bp Feature: domain Description: stabl_stabl_stabl_TIGR02574 Location: 2993254-2993434 bp Feature: gene Location: 3445181-3446410 bp Ori: QDS93902.1 Gene: tqsA_1 Feature: domain Description: PerM Location: 3445304-3446312 bp Feature: domain Description: PerM Location: 3445304-344631 2 bp Feature: gene Location: 3446628-3448298 bp Ori: QDS93903.1 Gene: omcB_2 Feature: domain Description: DUF11 Location: 3446760-3447024 bp Feature: domain Description: DUF1 1 Location: 3446760-3447024 bp Feature: domain Description: DUF11 Location: 3447168-3447330 bp Feature: domain Description: DUF1 1 Location: 34471 68-3447330 bp Feature: domain Description: DUF11 Location: 3447468-3447807 bp Feature: domain Description: DUF1 1 Location: 3447468-3447807 bp Feature: domain Description: DUF11 Location: 3447978-3448200 bp Feature: domain Description: DUF1 1 Location: 3447978-3448200 bp Feature: gene Location: 3449104-3449406 bp Ori: QDS93904.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3449119-3449212 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34491 1 9-344921 2 bp Feature: domain Description: GIIM Note: maturase Location: 3449254-3449398 bp Feature: domain Description: GIIM Note: maturase Location: 3449254-3449398 bp Feature: gene Location: 3449772-3450023 bp Feature: gene Location: 3450052-3450252 bp Feature: gene Location: 5728765-5728995 bp Feature: gene Location: 5729006-5729410 bp Feature: gene Location: 5729780-5731246 bp Ori: QDS95661.1 Gene: ltrA_7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5730188-5730878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57301 88-5730878 bp Feature: gene Location: 5731735-5732148 bp Feature: gene Location: 5732493-5732882 bp Feature: gene Location: 6074936-6075100 bp Feature: gene Location: 6075116-6075619 bp Feature: gene Location: 6075897-6078953 bp Ori: QDS95914.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6076452-6076944 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6076452-6076944 bp Feature: gene Location: 6079292-6079849 bp Feature: gene Location: 6079989-6081035 bp Ori: QDS95916.1 Gene: nucH_2 Feature: domain Description: YncB Location: 6080367-6080835 bp Feature: domain Description: YncB Location: 6080367-6080835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3864 (KOG3864, Uncharacterized conserved protein ), RVT-GII, GIIM (pfam08388), DUF3991 (pfam13154), Toprim_2 (pfam13155), COG3905 (Predicted transcriptional regulator ), stabl_stabl_stabl_TIGR02574, PerM (COG0628), DUF11 (pfam01345), RVT-DGRs
RVT-UG5, YncB (COG1525)