myRT

myRT report for GCA_007747015.1_ASM774701v1

Download annotations/find similar RTs

Seq: CP036353.1 Planctomycetes bacterium CA11 chromosome, complete genome (7626893 bp)
Overview 1 RT 1: 1380361-1387942 bp 2 RT 2: 2620890-2626113 bp 3 RT 3: 3733001-3737325 bp 4 RT 4: 4358535-4362781 bp Neighborhood of RT #1 [1380361, 1387947] PRK07561 RVT-Retrons S2P-M50_SpoIVFB MLE MR_MLE_C Neighborhood of RT #2 [2620890, 2626113] RVT-CRISPR-like COG4453 Neighborhood of RT #3 [3733001, 3737399] CDO_I DrsE RVT-GII GIIM SdpI Neighborhood of RT #4 [4358535, 4362795] RVT-CRISPR-like RNase_H_bacteria_like STKc_PknB_like Feature: gene Location: 1380361-1383090 bp Ori: QDU13324.1 Gene: topA Feature: domain Description: PRK07561 Location: 1380382-1383007 bp Feature: domain Description: PRK07561 Location: 1 380382-1 383007 bp Feature: gene Location: 1383108-1383899 bp Feature: gene Location: 1384046-1385320 bp Ori: QDU13326.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1384478-1385093 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 384478-1 385093 bp Feature: gene Location: 1385866-1386561 bp Ori: QDU13327.1 Gene: spoIVFB Feature: domain Description: S2P-M50_SpoIVFB Location: 1385935-1386544 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 1 385935-1 386544 bp Feature: gene Location: 1386595-1387947 bp Ori: QDU13328.1 Feature: domain Description: MLE Location: 1386643-1386799 bp Feature: domain Description: MLE Location: 1 386643-1 386799 bp Feature: domain Description: MR_MLE_C Location: 1387270-1387942 bp Feature: domain Description: MR_MLE_C Location: 1 387270-1 387942 bp Feature: gene Location: 2620890-2621021 bp Feature: gene Location: 2621064-2621270 bp Feature: gene Location: 2621636-2622976 bp Ori: QDU14199.1 Gene: ltrA_1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2621999-2622539 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2621 999-2622539 bp Feature: gene Location: 2623629-2623850 bp Ori: QDU14200.1 Feature: domain Description: COG4453 Location: 2623674-2623794 bp Feature: domain Description: COG4453 Location: 2623674-2623794 bp Feature: gene Location: 2624233-2626113 bp Feature: gene Location: 3733001-3733501 bp Ori: QDU15069.1 Gene: cdoA Feature: domain Description: CDO_I Location: 3733097-3733478 bp Feature: domain Description: CDO_I Location: 3733097-3733478 bp Feature: gene Location: 3733491-3734234 bp Ori: QDU15070.1 Feature: domain Description: DrsE Location: 3733881-3734229 bp Feature: domain Description: DrsE Location: 3733881 -3734229 bp Feature: gene Location: 3734694-3735725 bp Ori: QDU15071.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3734700-3735267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3734700-3735267 bp Feature: domain Description: GIIM Note: maturase Location: 3735315-3735540 bp Feature: domain Description: GIIM Note: maturase Location: 373531 5-3735540 bp Feature: gene Location: 3735656-3736663 bp Feature: gene Location: 3737127-3737399 bp Ori: QDU15073.1 Feature: domain Description: SdpI Location: 3737130-3737325 bp Feature: domain Description: SdpI Location: 37371 30-3737325 bp Feature: gene Location: 4358535-4359311 bp Feature: gene Location: 4359308-4359637 bp Feature: gene Location: 4359890-4361647 bp Ori: QDU15522.1 Gene: rnhA_1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4360280-4360883 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4360280-4360883 bp Feature: domain Description: RNase_H_bacteria_like Location: 4361252-4361645 bp Feature: domain Description: RNase_H_bacteria_like Location: 4361 252-4361 645 bp Feature: gene Location: 4361648-4361830 bp Feature: gene Location: 4361905-4362795 bp Ori: QDU15524.1 Gene: pknB_11 Feature: domain Description: STKc_PknB_like Location: 4361908-4362781 bp Feature: domain Description: STKc_PknB_like Location: 4361 908-4362781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07561 (DNA topoisomerase I subunit omega; Validated), RVT-Retrons, S2P-M50_SpoIVFB (cd06161), MLE (cd03318), MR_MLE_C (pfam13378), RVT-CRISPR, COG4453 (Uncharacterized conserved protein, DUF1778 family ), CDO_I (pfam05995), DrsE (pfam02635), RVT-GII
GIIM (pfam08388), SdpI (pfam13630), RNase_H_bacteria_like (cd13935), STKc_PknB_like (cd14014)