myRT

myRT report for GCA_007747655.1_ASM774765v1

Download annotations/find similar RTs

Seq: CP036274.1 Planctomycetes bacterium ETA_A8 chromosome, complete genome (9007740 bp)
Overview 1 RT 1: 1658601-1664227 bp 2 RT 2: 2141928-2146482 bp 3 RT 3: 2937918-2942896 bp 4 RT 4: 3057629-3064814 bp 5 RT 5: 5125653-5129104 bp 6 RT 6: 7310183-7316495 bp 7 RT 7: 7324019-7328011 bp 8 RT 8: 8174032-8179021 bp Neighborhood of RT #1 [1658601, 1664227] PHA02517 RVT-GII Neighborhood of RT #2 [2141928, 2146482] GALNS_like RVT-GII GIIM Neighborhood of RT #3 [2937918, 2942913] ycf46 RVT-GII Intron_maturas2 HNHc ycf46 Neighborhood of RT #4 [3057629, 3064814] LolD RVT-GII KOG4768 HNHc Laminin_G_3 Neighborhood of RT #5 [5125653, 5129104] RVT-GII GIIM Neighborhood of RT #6 [7310183, 7316495] Resolvase Recombinase Zn_ribbon_recom RVT-CRISPR-like DUF1016_N Neighborhood of RT #7 [7324019, 7328011] RVT-GII Neighborhood of RT #8 [8174032, 8179021] ycf46 RVT-GII Intron_maturas2 HNHc ycf46 Feature: gene Location: 1658601-1658903 bp Ori: QDU26262.1 Feature: domain Description: PHA02517 Location: 1658679-1658880 bp Feature: domain Description: PHA0251 7 Location: 1 658679-1 658880 bp Feature: gene Location: 1659767-1660435 bp Feature: gene Location: 1660965-1661579 bp Ori: QDU26264.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661331-1661481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 661 331 -1 661 481 bp Feature: gene Location: 1662054-1662377 bp Feature: gene Location: 1662506-1664227 bp Feature: gene Location: 2141928-2143277 bp Ori: QDU26627.1 Gene: atsA_12 Feature: domain Description: GALNS_like Location: 2142018-2143206 bp Feature: domain Description: GALNS_like Location: 21 4201 8-21 43206 bp Feature: gene Location: 2143626-2143922 bp Feature: gene Location: 2144505-2145893 bp Ori: QDU26629.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2144856-2145474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 44856-21 45474 bp Feature: domain Description: GIIM Note: maturase Location: 2145519-2145729 bp Feature: domain Description: GIIM Note: maturase Location: 21 4551 9-21 45729 bp Feature: gene Location: 2145936-2146133 bp Feature: gene Location: 2146144-2146482 bp Feature: gene Location: 2937918-2938871 bp Feature: gene Location: 2939012-2939503 bp Ori: QDU27230.1 Feature: domain Description: ycf46 Location: 2939072-2939405 bp Feature: domain Description: ycf46 Location: 2939072-2939405 bp Feature: gene Location: 2939564-2941357 bp Ori: QDU27231.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2939825-2940614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2939825-294061 4 bp Feature: domain Description: Intron_maturas2 Location: 2940746-2940959 bp Feature: domain Description: Intron_maturas2 Location: 2940746-2940959 bp Feature: domain Description: HNHc Note: nucleases Location: 2941160-2941313 bp Feature: domain Description: HNHc Note: nucleases Location: 2941 1 60-2941 31 3 bp Feature: gene Location: 2941436-2941849 bp Feature: gene Location: 2941849-2942913 bp Ori: QDU27233.1 Gene: ftsH3 Feature: domain Description: ycf46 Location: 2941852-2942896 bp Feature: domain Description: ycf46 Location: 2941 852-2942896 bp Feature: gene Location: 3057629-3058318 bp Ori: QDU27324.1 Gene: lolD_5 Feature: domain Description: LolD Location: 3057632-3058286 bp Feature: domain Description: LolD Location: 3057632-3058286 bp Feature: gene Location: 3058322-3058996 bp Feature: gene Location: 3059112-3060785 bp Ori: QDU27326.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059430-3060105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3059430-30601 05 bp Feature: domain Description: KOG4768 Location: 3060246-3060387 bp Feature: domain Description: KOG4768 Location: 3060246-3060387 bp Feature: domain Description: HNHc Note: nucleases Location: 3060591-3060771 bp Feature: domain Description: HNHc Note: nucleases Location: 3060591 -3060771 bp Feature: gene Location: 3061448-3063733 bp Ori: QDU27327.1 Feature: domain Description: Laminin_G_3 Location: 3061745-3062108 bp Feature: domain Description: Laminin_G_3 Location: 3061 745-30621 08 bp Feature: gene Location: 3064122-3064814 bp Feature: gene Location: 5125653-5125973 bp Feature: gene Location: 5126038-5126310 bp Feature: gene Location: 5126908-5128296 bp Ori: QDU28861.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5127259-5127877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 27259-51 27877 bp Feature: domain Description: GIIM Note: maturase Location: 5127922-5128132 bp Feature: domain Description: GIIM Note: maturase Location: 51 27922-51 281 32 bp Feature: gene Location: 5128477-5128719 bp Feature: gene Location: 5128907-5129104 bp Feature: gene Location: 7310183-7311682 bp Ori: QDU30634.1 Feature: domain Description: Resolvase Location: 7310192-7310636 bp Feature: domain Description: Resolvase Location: 731 01 92-731 0636 bp Feature: domain Description: Recombinase Location: 7310708-7310972 bp Feature: domain Description: Recombinase Location: 731 0708-731 0972 bp Feature: domain Description: Zn_ribbon_recom Location: 7311017-7311197 bp Feature: domain Description: Zn_ribbon_recom Location: 731 1 01 7-731 1 1 97 bp Feature: gene Location: 7312047-7312895 bp Feature: gene Location: 7312904-7314235 bp Ori: QDU30636.1 Gene: ltrA_6 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7313273-7313798 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 731 3273-731 3798 bp Feature: gene Location: 7314891-7315529 bp Ori: QDU30637.1 Feature: domain Description: DUF1016_N Location: 7315032-7315257 bp Feature: domain Description: DUF1 01 6_N Location: 731 5032-731 5257 bp Feature: gene Location: 7316265-7316495 bp Feature: gene Location: 7324019-7324114 bp Feature: gene Location: 7324180-7324761 bp Feature: gene Location: 7325654-7326067 bp Ori: QDU30648.1 Gene: ltrA_7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7325942-7326062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7325942-7326062 bp Feature: gene Location: 7326418-7327464 bp Feature: gene Location: 7327856-7328011 bp Feature: gene Location: 8174032-8175105 bp Ori: QDU31346.1 Gene: ftsH2_1 Feature: domain Description: ycf46 Location: 8174044-8175088 bp Feature: domain Description: ycf46 Location: 81 74044-81 75088 bp Feature: gene Location: 8175105-8175518 bp Feature: gene Location: 8175597-8177390 bp Ori: QDU31348.1 Gene: ltrA_8 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8175858-8176647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 75858-81 76647 bp Feature: domain Description: Intron_maturas2 Location: 8176779-8176992 bp Feature: domain Description: Intron_maturas2 Location: 81 76779-81 76992 bp Feature: domain Description: HNHc Note: nucleases Location: 8177193-8177346 bp Feature: domain Description: HNHc Note: nucleases Location: 81 771 93-81 77346 bp Feature: gene Location: 8177451-8177951 bp Ori: QDU31349.1 Feature: domain Description: ycf46 Location: 8177511-8177847 bp Feature: domain Description: ycf46 Location: 81 7751 1 -81 77847 bp Feature: gene Location: 8178077-8179021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GALNS_like (cd16026), GIIM (pfam08388), ycf46 (CHL00195), Intron_maturas2 (pfam01348), HNHc (smart00507), LolD (COG1136), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Laminin_G_3 (pfam13385)
Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-CRISPR, DUF1016_N (pfam17761)