myRT

myRT report for GCA_007748095.1_ASM774809v1

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Seq: CP036287.1 Planctomycetes bacterium Pla133 chromosome, complete genome (6899822 bp)
Overview 1 RT 1: 1254845-1267035 bp 2 RT 2: 3625786-3632532 bp 3 RT 3: 4113038-4119062 bp 4 RT 4: 4687558-4695124 bp 5 RT 5: 5930040-5937587 bp 6 RT 6: 6098278-6105462 bp 7 RT 7: 6524093-6528663 bp Neighborhood of RT #1 [1254845, 1267049] dnaE2 STKc_PknB_like YfmG RVT-DGRs HTH_17 COG5635 COG5635 YfmG Neighborhood of RT #2 [3625786, 3632532] Rhizobitoxine-FADS-like Trypsin_2 NACHT YfmG RVT-DGRs Avd_like Neighborhood of RT #3 [4113038, 4119062] CcmA ABC2_membrane_3 RVT-GII GIIM PAP2_haloperoxidase Neighborhood of RT #4 [4687558, 4695124] FG-GAP_2 FG-GAP_2 FG-GAP_2 vWA_interalpha_trypsin_inhibitor RVT-GII GIIM DUF839 Neighborhood of RT #5 [5930040, 5937997] M14_MpaA-like WD40 WD40 RVT-GII GIIM DHOR DHOR VCBS FG-GAP VCBS FG-GAP VCBS VCBS Neighborhood of RT #6 [6098278, 6105572] HRDC Avd_like RVT-DGRs STKc_PknB_like COG5635 YfmG viomycin_VioC viomycin_VioC Neighborhood of RT #7 [6524093, 6528713] DUF3052 COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1254845-1258261 bp Ori: QDU65900.1 Gene: dnaE2 Feature: domain Description: dnaE2 Location: 1254950-1258259 bp Feature: domain Description: dnaE2 Location: 1 254950-1 258259 bp Feature: gene Location: 1258367-1261267 bp Ori: QDU65901.1 Gene: spk1_1 Feature: domain Description: STKc_PknB_like Location: 1259453-1260203 bp Feature: domain Description: STKc_PknB_like Location: 1 259453-1 260203 bp Feature: domain Description: YfmG Location: 1260608-1261253 bp Feature: domain Description: YfmG Location: 1 260608-1 261 253 bp Feature: gene Location: 1261372-1262382 bp Ori: QDU65902.1 Gene: ltrA_1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1261579-1262281 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 261 579-1 262281 bp Feature: gene Location: 1263058-1263642 bp Ori: QDU65903.1 Feature: domain Description: HTH_17 Location: 1263067-1263190 bp Feature: domain Description: HTH_1 7 Location: 1 263067-1 2631 90 bp Feature: gene Location: 1263789-1267049 bp Ori: QDU65904.1 Gene: pkn1_2 Feature: domain Description: COG5635 Location: 1264962-1265325 bp Feature: domain Description: COG5635 Location: 1 264962-1 265325 bp Feature: domain Description: COG5635 Location: 1265463-1265595 bp Feature: domain Description: COG5635 Location: 1 265463-1 265595 bp Feature: domain Description: YfmG Location: 1266438-1267035 bp Feature: domain Description: YfmG Location: 1 266438-1 267035 bp Feature: gene Location: 3625786-3626937 bp Ori: QDU67644.1 Feature: domain Description: Rhizobitoxine-FADS-like Location: 3625960-3626590 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 3625960-3626590 bp Feature: gene Location: 3627034-3630258 bp Ori: QDU67645.1 Gene: pkn1_6 Feature: domain Description: Trypsin_2 Location: 3627109-3627628 bp Feature: domain Description: Trypsin_2 Location: 36271 09-3627628 bp Feature: domain Description: NACHT Location: 3628009-3628486 bp Feature: domain Description: NACHT Location: 3628009-3628486 bp Feature: domain Description: YfmG Location: 3629653-3630238 bp Feature: domain Description: YfmG Location: 3629653-3630238 bp Feature: gene Location: 3630584-3631585 bp Ori: QDU67646.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3630794-3631493 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3630794-3631 493 bp Feature: gene Location: 3631838-3632242 bp Ori: QDU67647.1 Feature: domain Description: Avd_like Location: 3631865-3632171 bp Feature: domain Description: Avd_like Location: 3631 865-36321 71 bp Feature: gene Location: 3632239-3632532 bp Feature: gene Location: 4113038-4113979 bp Ori: QDU68043.1 Gene: ybhF_3 Feature: domain Description: CcmA Location: 4113074-4113953 bp Feature: domain Description: CcmA Location: 41 1 3074-41 1 3953 bp Feature: gene Location: 4113976-4115112 bp Ori: QDU68044.1 Gene: ybhS Feature: domain Description: ABC2_membrane_3 Location: 4114060-4115086 bp Feature: domain Description: ABC2_membrane_3 Location: 41 1 4060-41 1 5086 bp Feature: gene Location: 4115529-4116725 bp Ori: QDU68045.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4115697-4116327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 5697-41 1 6327 bp Feature: domain Description: GIIM Note: maturase Location: 4116405-4116618 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 6405-41 1 661 8 bp Feature: gene Location: 4116846-4117880 bp Ori: QDU68046.1 Feature: domain Description: PAP2_haloperoxidase Location: 4116861-4117290 bp Feature: domain Description: PAP2_haloperoxidase Location: 41 1 6861 -41 1 7290 bp Feature: gene Location: 4118481-4119062 bp Feature: gene Location: 4687558-4689198 bp Ori: QDU68472.1 Feature: domain Description: FG-GAP_2 Location: 4687669-4687780 bp Feature: domain Description: FG-GAP_2 Location: 4687669-4687780 bp Feature: domain Description: FG-GAP_2 Location: 4688119-4688233 bp Feature: domain Description: FG-GAP_2 Location: 46881 1 9-4688233 bp Feature: domain Description: FG-GAP_2 Location: 4688494-4688572 bp Feature: domain Description: FG-GAP_2 Location: 4688494-4688572 bp Feature: gene Location: 4689267-4690898 bp Ori: QDU68473.1 Feature: domain Description: vWA_interalpha_trypsin_inhibitor Location: 4690371-4690764 bp Feature: domain Description: vWA_interalpha_trypsin_inhibitor Location: 4690371 -4690764 bp Feature: gene Location: 4691076-4692305 bp Ori: QDU68474.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4691268-4691883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4691 268-4691 883 bp Feature: domain Description: GIIM Note: maturase Location: 4691940-4692144 bp Feature: domain Description: GIIM Note: maturase Location: 4691 940-46921 44 bp Feature: gene Location: 4692910-4694595 bp Ori: QDU68475.1 Feature: domain Description: DUF839 Location: 4693924-4694248 bp Feature: domain Description: DUF839 Location: 4693924-4694248 bp Feature: gene Location: 4694765-4695124 bp Feature: gene Location: 5930040-5930897 bp Ori: QDU69405.1 Feature: domain Description: M14_MpaA-like Location: 5930274-5930889 bp Feature: domain Description: M1 4_MpaA-like Location: 5930274-5930889 bp Feature: gene Location: 5930917-5932830 bp Ori: QDU69406.1 Feature: domain Description: WD40 Location: 5931964-5932075 bp Feature: domain Description: WD40 Location: 5931 964-5932075 bp Feature: domain Description: WD40 Location: 5932429-5932819 bp Feature: domain Description: WD40 Location: 5932429-593281 9 bp Feature: gene Location: 5932950-5934179 bp Ori: QDU69407.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5933142-5933757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59331 42-5933757 bp Feature: domain Description: GIIM Note: maturase Location: 5933814-5934018 bp Feature: domain Description: GIIM Note: maturase Location: 593381 4-593401 8 bp Feature: gene Location: 5934767-5936146 bp Ori: QDU69408.1 Feature: domain Description: DHOR Location: 5934857-5934989 bp Feature: domain Description: DHOR Location: 5934857-5934989 bp Feature: domain Description: DHOR Location: 5935169-5935952 bp Feature: domain Description: DHOR Location: 59351 69-5935952 bp Feature: gene Location: 5936216-5937997 bp Ori: QDU69409.1 Feature: domain Description: VCBS Location: 5936315-5936414 bp Feature: domain Description: VCBS Location: 593631 5-593641 4 bp Feature: domain Description: FG-GAP Location: 5936570-5936618 bp Feature: domain Description: FG-GAP Location: 5936570-593661 8 bp Feature: domain Description: VCBS Location: 5936747-5936831 bp Feature: domain Description: VCBS Location: 5936747-5936831 bp Feature: domain Description: FG-GAP Location: 5936981-5937035 bp Feature: domain Description: FG-GAP Location: 5936981 -5937035 bp Feature: domain Description: VCBS Location: 5937059-5937200 bp Feature: domain Description: VCBS Location: 5937059-5937200 bp Feature: domain Description: VCBS Location: 5937341-5937587 bp Feature: domain Description: VCBS Location: 5937341 -5937587 bp Feature: gene Location: 6098278-6098814 bp Ori: QDU69534.1 Gene: recQ_3 Feature: domain Description: HRDC Location: 6098563-6098752 bp Feature: domain Description: HRDC Location: 6098563-6098752 bp Feature: gene Location: 6098811-6099236 bp Ori: QDU69535.1 Feature: domain Description: Avd_like Location: 6098877-6099180 bp Feature: domain Description: Avd_like Location: 6098877-60991 80 bp Feature: gene Location: 6099233-6100276 bp Ori: QDU69536.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6099440-6100103 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6099440-61 001 03 bp Feature: gene Location: 6100817-6104509 bp Ori: QDU69537.1 Gene: pkn1_14 Feature: domain Description: STKc_PknB_like Location: 6101123-6101897 bp Feature: domain Description: STKc_PknB_like Location: 61 01 1 23-61 01 897 bp Feature: domain Description: COG5635 Location: 6102257-6103007 bp Feature: domain Description: COG5635 Location: 61 02257-61 03007 bp Feature: domain Description: YfmG Location: 6103694-6104501 bp Feature: domain Description: YfmG Location: 61 03694-61 04501 bp Feature: gene Location: 6104595-6105572 bp Ori: QDU69538.1 Feature: domain Description: viomycin_VioC Location: 6104895-6105216 bp Feature: domain Description: viomycin_VioC Location: 61 04895-61 0521 6 bp Feature: domain Description: viomycin_VioC Location: 6105315-6105462 bp Feature: domain Description: viomycin_VioC Location: 61 0531 5-61 05462 bp Feature: gene Location: 6524093-6524503 bp Ori: QDU69831.1 Feature: domain Description: DUF3052 Location: 6524126-6524480 bp Feature: domain Description: DUF3052 Location: 65241 26-6524480 bp Feature: gene Location: 6525259-6526044 bp Ori: QDU69832.1 Feature: domain Description: COG3436 Location: 6525559-6525871 bp Feature: domain Description: COG3436 Location: 6525559-6525871 bp Feature: gene Location: 6526421-6527677 bp Ori: QDU69833.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6526625-6527282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6526625-6527282 bp Feature: domain Description: GIIM Note: maturase Location: 6527363-6527582 bp Feature: domain Description: GIIM Note: maturase Location: 6527363-6527582 bp Feature: gene Location: 6527727-6528044 bp Ori: QDU69834.1 Feature: domain Description: DDE_Tnp_IS66 Location: 6527745-6528036 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6527745-6528036 bp Feature: gene Location: 6528120-6528713 bp Ori: QDU69835.1 Feature: domain Description: DDE_Tnp_IS66 Location: 6528123-6528534 bp Feature: domain Description: DDE_Tnp_IS66 Location: 65281 23-6528534 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6528555-6528663 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6528555-6528663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE2 (PRK05672), STKc_PknB_like (cd14014), YfmG (COG1262), RVT-DGRs, HTH_17 (pfam12728), COG5635 (Predicted NTPase, NACHT family domain ), Rhizobitoxine-FADS-like (cd03510), Trypsin_2 (pfam13365), NACHT (pfam05729), Avd_like (cd16376)
CcmA (COG4133), ABC2_membrane_3 (pfam12698), RVT-GII, GIIM (pfam08388), PAP2_haloperoxidase (cd03398), FG-GAP_2 (pfam14312), vWA_interalpha_trypsin_inhibitor (cd01461), DUF839 (pfam05787), M14_MpaA-like (cd06904), WD40 (smart00320)
DHOR (pfam06537), VCBS (pfam13517), FG-GAP (pfam01839), HRDC (smart00341), viomycin_VioC (TIGR03946), DUF3052 (pfam11253), COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)