myRT

myRT report for GCA_007750855.1_ASM775085v1

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Seq: CP036291.1 Planctomycetes bacterium Pla175 chromosome, complete genome (6618662 bp)
Overview 1 RT 1: 2133735-2136069 bp 2 RT 2: 5739730-5746506 bp Neighborhood of RT #1 [2133735, 2136069] RVT-GII DDE_Tnp_1_5 Neighborhood of RT #2 [5739730, 5747228] TPR TPR TPR TPR DUF4041 T5orf172 RVT-Retrons PGRP DUF1565 Beta_helix NosD_copper_fam Feature: gene Location: 2133735-2134358 bp Ori: QDU88415.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2134032-2134314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 34032-21 3431 4 bp Feature: gene Location: 2134324-2135277 bp Ori: QDU88416.1 Feature: domain Description: DDE_Tnp_1_5 Location: 2134405-2134735 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 21 34405-21 34735 bp Feature: gene Location: 2135338-2136069 bp Feature: gene Location: 5739730-5740965 bp Ori: QDU91112.1 Gene: acsC Feature: domain Description: TPR Location: 5740036-5740288 bp Feature: domain Description: TPR Location: 5740036-5740288 bp Feature: domain Description: TPR Location: 5740294-5740483 bp Feature: domain Description: TPR Location: 5740294-5740483 bp Feature: domain Description: TPR Location: 5740525-5740777 bp Feature: domain Description: TPR Location: 5740525-5740777 bp Feature: domain Description: TPR Location: 5740798-5740909 bp Feature: domain Description: TPR Location: 5740798-5740909 bp Feature: gene Location: 5741332-5742951 bp Ori: QDU91113.1 Feature: domain Description: DUF4041 Location: 5742046-5742211 bp Feature: domain Description: DUF4041 Location: 5742046-574221 1 bp Feature: domain Description: T5orf172 Location: 5742559-5742796 bp Feature: domain Description: T5orf1 72 Location: 5742559-5742796 bp Feature: gene Location: 5743345-5744682 bp Ori: QDU91114.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5743798-5744437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5743798-5744437 bp Feature: gene Location: 5744992-5745726 bp Ori: QDU91115.1 Feature: domain Description: PGRP Location: 5745166-5745574 bp Feature: domain Description: PGRP Location: 57451 66-5745574 bp Feature: gene Location: 5745585-5747228 bp Ori: QDU91116.1 Feature: domain Description: DUF1565 Location: 5745663-5745771 bp Feature: domain Description: DUF1 565 Location: 5745663-5745771 bp Feature: domain Description: Beta_helix Location: 5745873-5746200 bp Feature: domain Description: Beta_helix Location: 5745873-5746200 bp Feature: domain Description: NosD_copper_fam Location: 5746242-5746506 bp Feature: domain Description: NosD_copper_fam Location: 5746242-5746506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_5 (pfam13737), TPR (smart00028), DUF4041 (pfam13250), T5orf172 (smart00974), RVT-Retrons, PGRP (smart00701), DUF1565 (pfam07602), Beta_helix (pfam13229), NosD_copper_fam (TIGR04247)