myRT

myRT report for GCA_007751255.1_ASM775125v1

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Seq: CP036296.1 Planctomycetes bacterium Pla86 chromosome, complete genome (6902109 bp)
Overview 1 RT 1: 1255552-1267742 bp 2 RT 2: 3627245-3633991 bp 3 RT 3: 4114496-4120520 bp 4 RT 4: 4689016-4696582 bp 5 RT 5: 5931785-5939332 bp 6 RT 6: 6100307-6107491 bp 7 RT 7: 6526376-6530946 bp Neighborhood of RT #1 [1255552, 1267756] dnaE2 STKc_PknB_like YfmG RVT-DGRs HTH_17 COG5635 COG5635 YfmG Neighborhood of RT #2 [3627245, 3633991] Rhizobitoxine-FADS-like Trypsin_2 NACHT YfmG RVT-DGRs Avd_like Neighborhood of RT #3 [4114496, 4120520] CcmA ABC2_membrane_3 RVT-GII GIIM PAP2_haloperoxidase Neighborhood of RT #4 [4689016, 4696582] FG-GAP_2 FG-GAP_2 FG-GAP_2 vWA_interalpha_trypsin_inhibitor RVT-GII GIIM DUF839 Neighborhood of RT #5 [5931785, 5939742] M14_MpaA-like WD40 WD40 RVT-GII GIIM DHOR DHOR VCBS FG-GAP VCBS FG-GAP VCBS VCBS Neighborhood of RT #6 [6100307, 6107601] HRDC Avd_like RVT-DGRs STKc_PknB_like COG5635 YfmG viomycin_VioC viomycin_VioC Neighborhood of RT #7 [6526376, 6530996] DUF3052 COG3436 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1255552-1258968 bp Ori: QDV00226.1 Gene: dnaE2 Feature: domain Description: dnaE2 Location: 1255657-1258966 bp Feature: domain Description: dnaE2 Location: 1 255657-1 258966 bp Feature: gene Location: 1259074-1261974 bp Ori: QDV00227.1 Gene: spk1_1 Feature: domain Description: STKc_PknB_like Location: 1260160-1260910 bp Feature: domain Description: STKc_PknB_like Location: 1 2601 60-1 26091 0 bp Feature: domain Description: YfmG Location: 1261315-1261960 bp Feature: domain Description: YfmG Location: 1 261 31 5-1 261 960 bp Feature: gene Location: 1262079-1263089 bp Ori: QDV00228.1 Gene: ltrA_1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1262286-1262988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 262286-1 262988 bp Feature: gene Location: 1263765-1264349 bp Ori: QDV00229.1 Feature: domain Description: HTH_17 Location: 1263774-1263897 bp Feature: domain Description: HTH_1 7 Location: 1 263774-1 263897 bp Feature: gene Location: 1264496-1267756 bp Ori: QDV00230.1 Gene: pkn1_2 Feature: domain Description: COG5635 Location: 1265669-1266032 bp Feature: domain Description: COG5635 Location: 1 265669-1 266032 bp Feature: domain Description: COG5635 Location: 1266170-1266302 bp Feature: domain Description: COG5635 Location: 1 2661 70-1 266302 bp Feature: domain Description: YfmG Location: 1267145-1267742 bp Feature: domain Description: YfmG Location: 1 2671 45-1 267742 bp Feature: gene Location: 3627245-3628396 bp Ori: QDV01970.1 Feature: domain Description: Rhizobitoxine-FADS-like Location: 3627419-3628049 bp Feature: domain Description: Rhizobitoxine-FADS-like Location: 362741 9-3628049 bp Feature: gene Location: 3628493-3631717 bp Ori: QDV01971.1 Gene: pkn1_6 Feature: domain Description: Trypsin_2 Location: 3628568-3629087 bp Feature: domain Description: Trypsin_2 Location: 3628568-3629087 bp Feature: domain Description: NACHT Location: 3629468-3629945 bp Feature: domain Description: NACHT Location: 3629468-3629945 bp Feature: domain Description: YfmG Location: 3631112-3631697 bp Feature: domain Description: YfmG Location: 3631 1 1 2-3631 697 bp Feature: gene Location: 3632043-3633044 bp Ori: QDV01972.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3632253-3632952 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3632253-3632952 bp Feature: gene Location: 3633297-3633701 bp Ori: QDV01973.1 Feature: domain Description: Avd_like Location: 3633324-3633630 bp Feature: domain Description: Avd_like Location: 3633324-3633630 bp Feature: gene Location: 3633698-3633991 bp Feature: gene Location: 4114496-4115437 bp Ori: QDV02369.1 Gene: ybhF_3 Feature: domain Description: CcmA Location: 4114532-4115411 bp Feature: domain Description: CcmA Location: 41 1 4532-41 1 541 1 bp Feature: gene Location: 4115434-4116570 bp Ori: QDV02370.1 Gene: ybhS Feature: domain Description: ABC2_membrane_3 Location: 4115518-4116544 bp Feature: domain Description: ABC2_membrane_3 Location: 41 1 551 8-41 1 6544 bp Feature: gene Location: 4116987-4118183 bp Ori: QDV02371.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4117155-4117785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 71 55-41 1 7785 bp Feature: domain Description: GIIM Note: maturase Location: 4117863-4118076 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 7863-41 1 8076 bp Feature: gene Location: 4118304-4119338 bp Ori: QDV02372.1 Feature: domain Description: PAP2_haloperoxidase Location: 4118319-4118748 bp Feature: domain Description: PAP2_haloperoxidase Location: 41 1 831 9-41 1 8748 bp Feature: gene Location: 4119939-4120520 bp Feature: gene Location: 4689016-4690656 bp Ori: QDV02797.1 Feature: domain Description: FG-GAP_2 Location: 4689127-4689238 bp Feature: domain Description: FG-GAP_2 Location: 46891 27-4689238 bp Feature: domain Description: FG-GAP_2 Location: 4689577-4689691 bp Feature: domain Description: FG-GAP_2 Location: 4689577-4689691 bp Feature: domain Description: FG-GAP_2 Location: 4689952-4690030 bp Feature: domain Description: FG-GAP_2 Location: 4689952-4690030 bp Feature: gene Location: 4690725-4692356 bp Ori: QDV02798.1 Feature: domain Description: vWA_interalpha_trypsin_inhibitor Location: 4691829-4692222 bp Feature: domain Description: vWA_interalpha_trypsin_inhibitor Location: 4691 829-4692222 bp Feature: gene Location: 4692534-4693763 bp Ori: QDV02799.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692726-4693341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4692726-4693341 bp Feature: domain Description: GIIM Note: maturase Location: 4693398-4693602 bp Feature: domain Description: GIIM Note: maturase Location: 4693398-4693602 bp Feature: gene Location: 4694368-4696053 bp Ori: QDV02800.1 Feature: domain Description: DUF839 Location: 4695382-4695706 bp Feature: domain Description: DUF839 Location: 4695382-4695706 bp Feature: gene Location: 4696223-4696582 bp Feature: gene Location: 5931785-5932642 bp Ori: QDV03731.1 Feature: domain Description: M14_MpaA-like Location: 5932019-5932634 bp Feature: domain Description: M1 4_MpaA-like Location: 593201 9-5932634 bp Feature: gene Location: 5932662-5934575 bp Ori: QDV03732.1 Feature: domain Description: WD40 Location: 5933709-5933820 bp Feature: domain Description: WD40 Location: 5933709-5933820 bp Feature: domain Description: WD40 Location: 5934174-5934564 bp Feature: domain Description: WD40 Location: 59341 74-5934564 bp Feature: gene Location: 5934695-5935924 bp Ori: QDV03733.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5934887-5935502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5934887-5935502 bp Feature: domain Description: GIIM Note: maturase Location: 5935559-5935763 bp Feature: domain Description: GIIM Note: maturase Location: 5935559-5935763 bp Feature: gene Location: 5936512-5937891 bp Ori: QDV03734.1 Feature: domain Description: DHOR Location: 5936602-5936734 bp Feature: domain Description: DHOR Location: 5936602-5936734 bp Feature: domain Description: DHOR Location: 5936914-5937697 bp Feature: domain Description: DHOR Location: 593691 4-5937697 bp Feature: gene Location: 5937961-5939742 bp Ori: QDV03735.1 Feature: domain Description: VCBS Location: 5938060-5938159 bp Feature: domain Description: VCBS Location: 5938060-59381 59 bp Feature: domain Description: FG-GAP Location: 5938315-5938363 bp Feature: domain Description: FG-GAP Location: 593831 5-5938363 bp Feature: domain Description: VCBS Location: 5938492-5938576 bp Feature: domain Description: VCBS Location: 5938492-5938576 bp Feature: domain Description: FG-GAP Location: 5938726-5938780 bp Feature: domain Description: FG-GAP Location: 5938726-5938780 bp Feature: domain Description: VCBS Location: 5938804-5938945 bp Feature: domain Description: VCBS Location: 5938804-5938945 bp Feature: domain Description: VCBS Location: 5939086-5939332 bp Feature: domain Description: VCBS Location: 5939086-5939332 bp Feature: gene Location: 6100307-6100843 bp Ori: QDV03860.1 Gene: recQ_3 Feature: domain Description: HRDC Location: 6100592-6100781 bp Feature: domain Description: HRDC Location: 61 00592-61 00781 bp Feature: gene Location: 6100840-6101265 bp Ori: QDV03861.1 Feature: domain Description: Avd_like Location: 6100906-6101209 bp Feature: domain Description: Avd_like Location: 61 00906-61 01 209 bp Feature: gene Location: 6101262-6102305 bp Ori: QDV03862.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6101469-6102132 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61 01 469-61 021 32 bp Feature: gene Location: 6102846-6106538 bp Ori: QDV03863.1 Gene: pkn1_14 Feature: domain Description: STKc_PknB_like Location: 6103152-6103926 bp Feature: domain Description: STKc_PknB_like Location: 61 031 52-61 03926 bp Feature: domain Description: COG5635 Location: 6104286-6105036 bp Feature: domain Description: COG5635 Location: 61 04286-61 05036 bp Feature: domain Description: YfmG Location: 6105723-6106530 bp Feature: domain Description: YfmG Location: 61 05723-61 06530 bp Feature: gene Location: 6106624-6107601 bp Ori: QDV03864.1 Feature: domain Description: viomycin_VioC Location: 6106924-6107245 bp Feature: domain Description: viomycin_VioC Location: 61 06924-61 07245 bp Feature: domain Description: viomycin_VioC Location: 6107344-6107491 bp Feature: domain Description: viomycin_VioC Location: 61 07344-61 07491 bp Feature: gene Location: 6526376-6526786 bp Ori: QDV04157.1 Feature: domain Description: DUF3052 Location: 6526409-6526763 bp Feature: domain Description: DUF3052 Location: 6526409-6526763 bp Feature: gene Location: 6527542-6528327 bp Ori: QDV04158.1 Feature: domain Description: COG3436 Location: 6527842-6528154 bp Feature: domain Description: COG3436 Location: 6527842-65281 54 bp Feature: gene Location: 6528704-6529960 bp Ori: QDV04159.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6528908-6529565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6528908-6529565 bp Feature: domain Description: GIIM Note: maturase Location: 6529646-6529865 bp Feature: domain Description: GIIM Note: maturase Location: 6529646-6529865 bp Feature: gene Location: 6530010-6530327 bp Ori: QDV04160.1 Feature: domain Description: DDE_Tnp_IS66 Location: 6530028-6530319 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6530028-653031 9 bp Feature: gene Location: 6530403-6530996 bp Ori: QDV04161.1 Feature: domain Description: DDE_Tnp_IS66 Location: 6530406-6530817 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6530406-653081 7 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6530838-6530946 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6530838-6530946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaE2 (PRK05672), STKc_PknB_like (cd14014), YfmG (COG1262), RVT-DGRs, HTH_17 (pfam12728), COG5635 (Predicted NTPase, NACHT family domain ), Rhizobitoxine-FADS-like (cd03510), Trypsin_2 (pfam13365), NACHT (pfam05729), Avd_like (cd16376)
CcmA (COG4133), ABC2_membrane_3 (pfam12698), RVT-GII, GIIM (pfam08388), PAP2_haloperoxidase (cd03398), FG-GAP_2 (pfam14312), vWA_interalpha_trypsin_inhibitor (cd01461), DUF839 (pfam05787), M14_MpaA-like (cd06904), WD40 (smart00320)
DHOR (pfam06537), VCBS (pfam13517), FG-GAP (pfam01839), HRDC (smart00341), viomycin_VioC (TIGR03946), DUF3052 (pfam11253), COG3436 (Transposase ), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)