myRT

myRT report for GCA_007751715.1_ASM775171v1

Download annotations/find similar RTs

Seq: CP036292.1 Planctomycetes bacterium CA51 chromosome, complete genome (7250512 bp)
Overview 1 RT 1: 256524-262985 bp 2 RT 2: 746530-755178 bp 3 RT 3: 1767570-1773447 bp 4 RT 4: 1863716-1870819 bp 5 RT 5: 1913992-1919093 bp 6 RT 6: 2898031-2904694 bp 7 RT 7: 5606124-5615627 bp 8 RT 8: 5718569-5723258 bp 9 RT 9: 5881516-5886215 bp 10 RT 10: 5956975-5965060 bp Neighborhood of RT #1 [256524, 262987] S2P-M50_SpoIVFB HC2 RVT-GII GIIM marine_trans_1 GlnK Neighborhood of RT #2 [746530, 755306] N_methyl SBP_bac_10 RVT-GII GIIM PQQ_3 PQQ_2 PQQ_2 PSCyt1 PSCyt2 PSD1 Neighborhood of RT #3 [1767570, 1773447] RVT-UNC Neighborhood of RT #4 [1863716, 1870819] Transposase_mut XerC RVT-GII GIIM cysK Neighborhood of RT #5 [1913992, 1919107] N_methyl SBP_bac_10 RVT-GII GIIM DDE_3 HTH_32 Neighborhood of RT #6 [2898031, 2904729] RVT-GII GIIM Cellulase Tnp_DNA_bind Dimer_Tnp_Tn5 Neighborhood of RT #7 [5606124, 5615638] ClcA CBS_pair_voltage-gated_CLC_bac PLN02505 RVT-GII GIIM DUF11 DUF11 DUF11 DUF11 TPR_20 TPR_20 Neighborhood of RT #8 [5718569, 5723263] GIIM COG3293 COG3293 RVT-GII MviM KOG3267 Neighborhood of RT #9 [5881516, 5886226] DDE_3 HTH_32 RVT-GII GIIM YHS ATPase-cat_bd MotB Neighborhood of RT #10 [5956975, 5965080] VWA GATase1_like beta_CA_cladeB RVT-GII GIIM Cytochrome_C554 Cytochrome_C7 Cytochrome_C7 PEP_TPR_lipo Feature: gene Location: 256524-257303 bp Ori: QDV10329.1 Feature: domain Description: S2P-M50_SpoIVFB Location: 256596-257253 bp Feature: domain Description: S2P-M50_SpoIVFB Location: 256596-257253 bp Feature: gene Location: 257592-257903 bp Ori: QDV10330.1 Feature: domain Description: HC2 Location: 257598-257886 bp Feature: domain Description: HC2 Location: 257598-257886 bp Feature: gene Location: 258787-260055 bp Ori: QDV10331.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259003-259621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259003-259621 bp Feature: domain Description: GIIM Note: maturase Location: 259666-259879 bp Feature: domain Description: GIIM Note: maturase Location: 259666-259879 bp Feature: gene Location: 260859-262316 bp Ori: QDV10332.1 Gene: nrgA Feature: domain Description: marine_trans_1 Location: 261075-262287 bp Feature: domain Description: marine_trans_1 Location: 261 075-262287 bp Feature: gene Location: 262640-262987 bp Ori: QDV10333.1 Gene: glnB_1 Feature: domain Description: GlnK Location: 262643-262985 bp Feature: domain Description: GlnK Location: 262643-262985 bp Feature: gene Location: 746530-746715 bp Feature: gene Location: 746925-747956 bp Ori: QDV10698.1 Feature: domain Description: N_methyl Location: 746943-747015 bp Feature: domain Description: N_methyl Location: 746943-74701 5 bp Feature: domain Description: SBP_bac_10 Location: 747030-747897 bp Feature: domain Description: SBP_bac_1 0 Location: 747030-747897 bp Feature: gene Location: 748844-750112 bp Ori: QDV10699.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749060-749678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749060-749678 bp Feature: domain Description: GIIM Note: maturase Location: 749723-749936 bp Feature: domain Description: GIIM Note: maturase Location: 749723-749936 bp Feature: gene Location: 750474-751823 bp Ori: QDV10700.1 Feature: domain Description: PQQ_3 Location: 750645-750720 bp Feature: domain Description: PQQ_3 Location: 750645-750720 bp Feature: domain Description: PQQ_2 Location: 750825-751281 bp Feature: domain Description: PQQ_2 Location: 750825-751 281 bp Feature: domain Description: PQQ_2 Location: 751494-751695 bp Feature: domain Description: PQQ_2 Location: 751 494-751 695 bp Feature: gene Location: 752196-755306 bp Ori: QDV10701.1 Feature: domain Description: PSCyt1 Location: 752370-752541 bp Feature: domain Description: PSCyt1 Location: 752370-752541 bp Feature: domain Description: PSCyt2 Location: 752736-753366 bp Feature: domain Description: PSCyt2 Location: 752736-753366 bp Feature: domain Description: PSD1 Location: 754434-755178 bp Feature: domain Description: PSD1 Location: 754434-7551 78 bp Feature: gene Location: 1767570-1767950 bp Feature: gene Location: 1768521-1768739 bp Feature: gene Location: 1769576-1770859 bp Ori: QDV11446.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1769942-1770491 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 769942-1 770491 bp Feature: gene Location: 1770843-1772360 bp Feature: gene Location: 1772734-1773447 bp Feature: gene Location: 1863716-1865020 bp Ori: QDV11500.1 Feature: domain Description: Transposase_mut Location: 1863806-1864934 bp Feature: domain Description: Transposase_mut Location: 1 863806-1 864934 bp Feature: gene Location: 1865051-1866214 bp Ori: QDV11501.1 Feature: domain Description: XerC Location: 1865312-1866212 bp Feature: domain Description: XerC Location: 1 86531 2-1 86621 2 bp Feature: gene Location: 1867793-1869061 bp Ori: QDV11502.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868009-1868627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 868009-1 868627 bp Feature: domain Description: GIIM Note: maturase Location: 1868672-1868885 bp Feature: domain Description: GIIM Note: maturase Location: 1 868672-1 868885 bp Feature: gene Location: 1869614-1870549 bp Ori: QDV11503.1 Gene: cysK1 Feature: domain Description: cysK Location: 1869647-1870538 bp Feature: domain Description: cysK Location: 1 869647-1 870538 bp Feature: gene Location: 1870607-1870819 bp Feature: gene Location: 1913992-1914441 bp Feature: gene Location: 1914616-1915638 bp Ori: QDV11543.1 Gene: pulG_2 Feature: domain Description: N_methyl Location: 1914628-1914703 bp Feature: domain Description: N_methyl Location: 1 91 4628-1 91 4703 bp Feature: domain Description: SBP_bac_10 Location: 1914718-1915579 bp Feature: domain Description: SBP_bac_1 0 Location: 1 91 471 8-1 91 5579 bp Feature: gene Location: 1916934-1918004 bp Ori: QDV11544.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1917150-1917768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 71 50-1 91 7768 bp Feature: domain Description: GIIM Note: maturase Location: 1917813-1917966 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 781 3-1 91 7966 bp Feature: gene Location: 1917972-1918667 bp Ori: QDV11545.1 Feature: domain Description: DDE_3 Location: 1918092-1918542 bp Feature: domain Description: DDE_3 Location: 1 91 8092-1 91 8542 bp Feature: gene Location: 1918664-1919107 bp Ori: QDV11546.1 Feature: domain Description: HTH_32 Location: 1918850-1919093 bp Feature: domain Description: HTH_32 Location: 1 91 8850-1 91 9093 bp Feature: gene Location: 2898031-2898885 bp Feature: gene Location: 2898951-2899061 bp Feature: gene Location: 2900159-2901427 bp Ori: QDV12249.1 Gene: ltrA_5 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2900375-2900993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2900375-2900993 bp Feature: domain Description: GIIM Note: maturase Location: 2901038-2901251 bp Feature: domain Description: GIIM Note: maturase Location: 2901 038-2901 251 bp Feature: gene Location: 2901851-2903041 bp Ori: QDV12250.1 Feature: domain Description: Cellulase Location: 2902145-2902769 bp Feature: domain Description: Cellulase Location: 29021 45-2902769 bp Feature: gene Location: 2903305-2904729 bp Ori: QDV12251.1 Gene: tnpA_8 Feature: domain Description: Tnp_DNA_bind Location: 2903329-2903488 bp Feature: domain Description: Tnp_DNA_bind Location: 2903329-2903488 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2904439-2904694 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2904439-2904694 bp Feature: gene Location: 5606124-5607983 bp Ori: QDV14214.1 Gene: clcA Feature: domain Description: ClcA Location: 5606178-5607534 bp Feature: domain Description: ClcA Location: 56061 78-5607534 bp Feature: domain Description: CBS_pair_voltage-gated_CLC_bac Location: 5607606-5607945 bp Feature: domain Description: CBS_pair_voltage-gated_CLC_bac Location: 5607606-5607945 bp Feature: gene Location: 5608376-5609524 bp Ori: QDV14215.1 Gene: desA Feature: domain Description: PLN02505 Location: 5608427-5609489 bp Feature: domain Description: PLN02505 Location: 5608427-5609489 bp Feature: gene Location: 5610409-5611677 bp Ori: QDV14216.1 Gene: ltrA_6 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5610625-5611243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 561 0625-561 1 243 bp Feature: domain Description: GIIM Note: maturase Location: 5611288-5611501 bp Feature: domain Description: GIIM Note: maturase Location: 561 1 288-561 1 501 bp Feature: gene Location: 5612574-5615159 bp Ori: QDV14217.1 Gene: omcB_2 Feature: domain Description: DUF11 Location: 5613792-5614050 bp Feature: domain Description: DUF1 1 Location: 561 3792-561 4050 bp Feature: domain Description: DUF11 Location: 5614158-5614341 bp Feature: domain Description: DUF1 1 Location: 561 41 58-561 4341 bp Feature: domain Description: DUF11 Location: 5614476-5614662 bp Feature: domain Description: DUF1 1 Location: 561 4476-561 4662 bp Feature: domain Description: DUF11 Location: 5614800-5615034 bp Feature: domain Description: DUF1 1 Location: 561 4800-561 5034 bp Feature: gene Location: 5615318-5615638 bp Ori: QDV14218.1 Feature: domain Description: TPR_20 Location: 5615333-5615450 bp Feature: domain Description: TPR_20 Location: 561 5333-561 5450 bp Feature: domain Description: TPR_20 Location: 5615480-5615627 bp Feature: domain Description: TPR_20 Location: 561 5480-561 5627 bp Feature: gene Location: 5718569-5718814 bp Ori: QDV14296.1 Feature: domain Description: GIIM Note: maturase Location: 5718596-5718737 bp Feature: domain Description: GIIM Note: maturase Location: 571 8596-571 8737 bp Feature: gene Location: 5718840-5719658 bp Ori: QDV14297.1 Feature: domain Description: COG3293 Location: 5718849-5719101 bp Feature: domain Description: COG3293 Location: 571 8849-571 91 01 bp Feature: domain Description: COG3293 Location: 5719248-5719650 bp Feature: domain Description: COG3293 Location: 571 9248-571 9650 bp Feature: gene Location: 5719737-5720891 bp Ori: QDV14298.1 Gene: ltrA_7 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5720118-5720778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57201 1 8-5720778 bp Feature: gene Location: 5721637-5722692 bp Ori: QDV14299.1 Feature: domain Description: MviM Location: 5721733-5722177 bp Feature: domain Description: MviM Location: 5721 733-57221 77 bp Feature: gene Location: 5722901-5723263 bp Ori: QDV14300.1 Feature: domain Description: KOG3267 Location: 5722904-5723258 bp Feature: domain Description: KOG3267 Location: 5722904-5723258 bp Feature: gene Location: 5881516-5882211 bp Ori: QDV14427.1 Feature: domain Description: DDE_3 Location: 5881636-5882086 bp Feature: domain Description: DDE_3 Location: 5881 636-5882086 bp Feature: gene Location: 5882208-5882651 bp Ori: QDV14428.1 Feature: domain Description: HTH_32 Location: 5882394-5882637 bp Feature: domain Description: HTH_32 Location: 5882394-5882637 bp Feature: gene Location: 5882742-5884010 bp Ori: QDV14429.1 Gene: ltrA_8 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5882958-5883576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5882958-5883576 bp Feature: domain Description: GIIM Note: maturase Location: 5883621-5883834 bp Feature: domain Description: GIIM Note: maturase Location: 5883621 -5883834 bp Feature: gene Location: 5884919-5885380 bp Ori: QDV14430.1 Feature: domain Description: YHS Location: 5885027-5885153 bp Feature: domain Description: YHS Location: 5885027-58851 53 bp Feature: domain Description: ATPase-cat_bd Location: 5885201-5885300 bp Feature: domain Description: ATPase-cat_bd Location: 5885201 -5885300 bp Feature: gene Location: 5885501-5886226 bp Ori: QDV14431.1 Gene: yiaD Feature: domain Description: MotB Location: 5885528-5886215 bp Feature: domain Description: MotB Location: 5885528-588621 5 bp Feature: gene Location: 5956975-5959260 bp Ori: QDV14478.1 Feature: domain Description: VWA Location: 5957206-5957668 bp Feature: domain Description: VWA Location: 5957206-5957668 bp Feature: domain Description: GATase1_like Location: 5958175-5958664 bp Feature: domain Description: GATase1 _like Location: 59581 75-5958664 bp Feature: gene Location: 5959368-5960033 bp Ori: QDV14479.1 Gene: icfA Feature: domain Description: beta_CA_cladeB Location: 5959389-5959944 bp Feature: domain Description: beta_CA_cladeB Location: 5959389-5959944 bp Feature: gene Location: 5960300-5961568 bp Ori: QDV14480.1 Gene: ltrA_9 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5960516-5961134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596051 6-5961 1 34 bp Feature: domain Description: GIIM Note: maturase Location: 5961179-5961392 bp Feature: domain Description: GIIM Note: maturase Location: 5961 1 79-5961 392 bp Feature: gene Location: 5961736-5962029 bp Feature: gene Location: 5963266-5965080 bp Ori: QDV14482.1 Feature: domain Description: Cytochrome_C554 Location: 5963440-5963515 bp Feature: domain Description: Cytochrome_C554 Location: 5963440-596351 5 bp Feature: domain Description: Cytochrome_C7 Location: 5963824-5964073 bp Feature: domain Description: Cytochrome_C7 Location: 5963824-5964073 bp Feature: domain Description: Cytochrome_C7 Location: 5964256-5964430 bp Feature: domain Description: Cytochrome_C7 Location: 5964256-5964430 bp Feature: domain Description: PEP_TPR_lipo Location: 5964673-5965060 bp Feature: domain Description: PEP_TPR_lipo Location: 5964673-5965060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S2P-M50_SpoIVFB (cd06161), HC2 (pfam07382), RVT-GII, GIIM (pfam08388), marine_trans_1 (TIGR03644), GlnK (COG0347), N_methyl (pfam07963), SBP_bac_10 (pfam07596), PQQ_3 (pfam13570), PQQ_2 (pfam13360)
PSCyt1 (pfam07635), PSCyt2 (pfam07583), PSD1 (pfam07587), RVT-UG27/RVT-CRISPR/RVT-G2Lb(RVT-UNC), Transposase_mut (pfam00872), XerC (COG4973), cysK (TIGR01139), DDE_3 (pfam13358), HTH_32 (pfam13565), Cellulase (pfam00150)
Tnp_DNA_bind (pfam14706), Dimer_Tnp_Tn5 (pfam02281), ClcA (COG0038), CBS_pair_voltage-gated_CLC_bac (cd04613), PLN02505 (omega-6 fatty acid desaturase), DUF11 (pfam01345), TPR_20 (pfam14561), COG3293 (Transposase ), MviM (COG0673), KOG3267 (KOG3267, Uncharacterized conserved protein )
YHS (pfam04945), ATPase-cat_bd (pfam12156), MotB (COG1360), VWA (smart00327), GATase1_like (pfam07090), beta_CA_cladeB (cd00884), Cytochrome_C554 (pfam13435), Cytochrome_C7 (pfam14522), PEP_TPR_lipo (TIGR02917)