myRT

myRT report for GCA_007833495.1_ASM783349v1

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Seq: CP022560.1 Pseudomonas putida strain B1 chromosome, complete genome (6368486 bp)
Overview 1 RT 1: 1998443-2007118 bp 2 RT 2: 6075244-6082958 bp Neighborhood of RT #1 [1998443, 2007171] PRK07232 MrcA RVT_N RVT-GII YkfC HNHc PilM PilN Neighborhood of RT #2 [6075244, 6082993] HNHc RVT-UG5 nitrilase GrpB PRK08118 Feature: gene Location: 1998443-1999711 bp Ori: QDY36437.1 Feature: domain Description: PRK07232 Location: 1998452-1999661 bp Feature: domain Description: PRK07232 Location: 1 998452-1 999661 bp Feature: gene Location: 2000121-2002574 bp Ori: QDY36438.1 Feature: domain Description: MrcA Location: 2000127-2002500 bp Feature: domain Description: MrcA Location: 20001 27-2002500 bp Feature: gene Location: 2002703-2004409 bp Ori: QDY36439.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2002760-2003003 bp Feature: domain Description: RVT_N Location: 2002760-2003003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2003048-2003684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2003048-2003684 bp Feature: domain Description: YkfC Location: 2003882-2003987 bp Feature: domain Description: YkfC Location: 2003882-2003987 bp Feature: domain Description: HNHc Note: nucleases Location: 2004197-2004353 bp Feature: domain Description: HNHc Note: nucleases Location: 20041 97-2004353 bp Feature: gene Location: 2005757-2006638 bp Ori: QDY36440.1 Feature: domain Description: PilM Location: 2005760-2006294 bp Feature: domain Description: PilM Location: 2005760-2006294 bp Feature: gene Location: 2006635-2007171 bp Ori: QDY36441.1 Feature: domain Description: PilN Location: 2006638-2007118 bp Feature: domain Description: PilN Location: 2006638-20071 1 8 bp Feature: gene Location: 6075244-6076029 bp Ori: QDY39930.1 Feature: domain Description: HNHc Note: nucleases Location: 6075811-6075982 bp Feature: domain Description: HNHc Note: nucleases Location: 607581 1 -6075982 bp Feature: gene Location: 6077207-6077620 bp Feature: gene Location: 6078378-6081596 bp Ori: QDY39932.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6078909-6079404 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6078909-6079404 bp Feature: domain Description: nitrilase Location: 6080904-6081507 bp Feature: domain Description: nitrilase Location: 6080904-6081 507 bp Feature: gene Location: 6081876-6082388 bp Ori: QDY39933.1 Feature: domain Description: GrpB Location: 6081894-6082356 bp Feature: domain Description: GrpB Location: 6081 894-6082356 bp Feature: gene Location: 6082454-6082993 bp Feature: domain Description: PRK08118 Location: 6082457-6082958 bp Feature: domain Description: PRK081 1 8 Location: 6082457-6082958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07232 (bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed), MrcA (COG5009), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PilM (pfam07419), PilN (pfam05137), RVT-UG5, nitrilase (cl11424)
GrpB (pfam04229), PRK08118 (DNA topology modulation protein)