myRT

myRT report for GCA_007833875.1_ASM783387v1

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Seq: CP040454.1 Escherichia coli strain UPEC132 plasmid unnamed1, complete sequence (117139 bp)
Overview 1 RT 1: 3-3326 bp 2 RT 2: 21713-25943 bp Neighborhood of RT #1 [3, 3391] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [21713, 25966] SEF14_adhesin YjiK RVT-GII GIIM PRK15185 Feature: gene Location: 3-230 bp Feature: gene Location: 432-878 bp Feature: domain Description: PHA02517 Location: 435-876 bp Feature: domain Description: PHA0251 7 Location: 435-876 bp Feature: gene Location: 995-2518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1268-2000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 268-2000 bp Feature: domain Description: GIIM Note: maturase Location: 2075-2273 bp Feature: domain Description: GIIM Note: maturase Location: 2075-2273 bp Feature: gene Location: 2472-2897 bp Feature: gene Location: 3110-3391 bp Feature: domain Description: PHA02517 Location: 3116-3326 bp Feature: domain Description: PHA0251 7 Location: 31 1 6-3326 bp Feature: gene Location: 21713-22198 bp Feature: domain Description: SEF14_adhesin Location: 21737-21974 bp Feature: domain Description: SEF1 4_adhesin Location: 21 737-21 974 bp Feature: gene Location: 22635-23051 bp Feature: domain Description: YjiK Location: 22653-23046 bp Feature: domain Description: YjiK Location: 22653-23046 bp Feature: gene Location: 23229-24617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23559-24177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23559-241 77 bp Feature: domain Description: GIIM Note: maturase Location: 24225-24456 bp Feature: domain Description: GIIM Note: maturase Location: 24225-24456 bp Feature: gene Location: 24845-25075 bp Feature: gene Location: 25175-25966 bp Feature: domain Description: PRK15185 Location: 25571-25943 bp Feature: domain Description: PRK1 51 85 Location: 25571 -25943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), SEF14_adhesin (pfam06443), YjiK (COG3204), PRK15185 (transcriptional regulator HilD; Provisional)