myRT

myRT report for GCA_007855915.1_ASM785591v1

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Seq: CP042251.1 Geobacillus thermoleovorans strain ARTRW1 chromosome, complete genome (3595045 bp)
Overview 1 RT 1: 434492-440666 bp 2 RT 2: 894031-898854 bp 3 RT 3: 1029549-1033048 bp 4 RT 4: 1376044-1383223 bp 5 RT 5: 1439168-1441793 bp 6 RT 6: 1582171-1586500 bp 7 RT 7: 1724567-1727901 bp 8 RT 8: 1948514-1954757 bp 9 RT 9: 2606845-2610449 bp 10 RT 10: 3154765-3158268 bp Neighborhood of RT #1 [434492, 440722] DDE_Tnp_1 RVT-GII GIIM AlsT TMR_SDR_a Neighborhood of RT #2 [894031, 898874] RVT-GII GIIM YjzC chaperone_ClpB Neighborhood of RT #3 [1029549, 1033074] RsgI_N RVT-GII GIIM SASP PBP2_UgpB Neighborhood of RT #4 [1376044, 1383225] PRK00549 recA RVT-GII HNHc recA RNase_Y Neighborhood of RT #5 [1439168, 1441793] RVT-GII GIIM CspC Neighborhood of RT #6 [1582171, 1586502] RVT-GII GIIM FhuD UPF0236 Neighborhood of RT #7 [1724567, 1727984] RVT-GII GIIM BaeS MFS_FsR Neighborhood of RT #8 [1948514, 1954762] YdjM narG RVT-GII GIIM narG Neighborhood of RT #9 [2606845, 2610449] spore_ytvI DedA RVT-GII GIIM Neighborhood of RT #10 [3154765, 3158268] TRX_reduct HTH_psq RVT-GII GIIM Feature: gene Location: 434492-435625 bp Ori: QDY72125.1 Feature: domain Description: DDE_Tnp_1 Location: 434822-435452 bp Feature: domain Description: DDE_Tnp_1 Location: 434822-435452 bp Feature: gene Location: 435972-436157 bp Feature: gene Location: 436456-437715 bp Ori: QDY72127.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436654-437272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436654-437272 bp Feature: domain Description: GIIM Note: maturase Location: 437320-437533 bp Feature: domain Description: GIIM Note: maturase Location: 437320-437533 bp Feature: gene Location: 438124-439593 bp Ori: QDY72128.1 Feature: domain Description: AlsT Location: 438130-439495 bp Feature: domain Description: AlsT Location: 4381 30-439495 bp Feature: gene Location: 439847-440722 bp Ori: QDY72129.1 Feature: domain Description: TMR_SDR_a Location: 439856-440666 bp Feature: domain Description: TMR_SDR_a Location: 439856-440666 bp Feature: gene Location: 894031-894216 bp Feature: gene Location: 894384-894582 bp Feature: gene Location: 894515-895774 bp Ori: QDY72527.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894713-895331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89471 3-895331 bp Feature: domain Description: GIIM Note: maturase Location: 895379-895592 bp Feature: domain Description: GIIM Note: maturase Location: 895379-895592 bp Feature: gene Location: 896002-896181 bp Ori: QDY72528.1 Feature: domain Description: YjzC Location: 896005-896167 bp Feature: domain Description: YjzC Location: 896005-8961 67 bp Feature: gene Location: 896289-898874 bp Ori: QDY72529.1 Gene: clpB Feature: domain Description: chaperone_ClpB Location: 896307-898854 bp Feature: domain Description: chaperone_ClpB Location: 896307-898854 bp Feature: gene Location: 1029549-1030616 bp Ori: QDY72648.1 Feature: domain Description: RsgI_N Location: 1029570-1029720 bp Feature: domain Description: RsgI_N Location: 1 029570-1 029720 bp Feature: gene Location: 1030707-1030892 bp Feature: gene Location: 1031191-1032450 bp Ori: QDY72650.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031389-1032007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 389-1 032007 bp Feature: domain Description: GIIM Note: maturase Location: 1032055-1032268 bp Feature: domain Description: GIIM Note: maturase Location: 1 032055-1 032268 bp Feature: gene Location: 1032516-1032716 bp Ori: QDY72651.1 Feature: domain Description: SASP Location: 1032534-1032696 bp Feature: domain Description: SASP Location: 1 032534-1 032696 bp Feature: gene Location: 1032835-1033074 bp Feature: domain Description: PBP2_UgpB Location: 1032844-1033048 bp Feature: domain Description: PBP2_UgpB Location: 1 032844-1 033048 bp Feature: gene Location: 1376044-1377288 bp Ori: QDY72972.1 Feature: domain Description: PRK00549 Location: 1376050-1377277 bp Feature: domain Description: PRK00549 Location: 1 376050-1 377277 bp Feature: gene Location: 1377467-1377754 bp Feature: domain Description: recA Location: 1377473-1377755 bp Feature: domain Description: recA Location: 1 377473-1 377755 bp Feature: gene Location: 1378591-1380405 bp Ori: QDY72973.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378846-1379557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 378846-1 379557 bp Feature: domain Description: HNHc Note: nucleases Location: 1380154-1380319 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3801 54-1 38031 9 bp Feature: gene Location: 1380451-1381293 bp Ori: QDY72974.1 Gene: recA Feature: domain Description: recA Location: 1380541-1381252 bp Feature: domain Description: recA Location: 1 380541 -1 381 252 bp Feature: gene Location: 1381669-1383225 bp Ori: QDY72975.1 Gene: rny Feature: domain Description: RNase_Y Location: 1381687-1383223 bp Feature: domain Description: RNase_Y Location: 1 381 687-1 383223 bp Feature: gene Location: 1439168-1439353 bp Feature: gene Location: 1439521-1439719 bp Feature: gene Location: 1439652-1440911 bp Ori: QDY73028.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1439850-1440468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 439850-1 440468 bp Feature: domain Description: GIIM Note: maturase Location: 1440516-1440729 bp Feature: domain Description: GIIM Note: maturase Location: 1 44051 6-1 440729 bp Feature: gene Location: 1441021-1441221 bp Ori: QDY73029.1 Feature: domain Description: CspC Location: 1441024-1441216 bp Feature: domain Description: CspC Location: 1 441 024-1 441 21 6 bp Feature: gene Location: 1441542-1441793 bp Feature: gene Location: 1582171-1582356 bp Feature: gene Location: 1582524-1582722 bp Feature: gene Location: 1582655-1583914 bp Ori: QDY73134.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1582853-1583471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 582853-1 583471 bp Feature: domain Description: GIIM Note: maturase Location: 1583519-1583732 bp Feature: domain Description: GIIM Note: maturase Location: 1 58351 9-1 583732 bp Feature: gene Location: 1583999-1584970 bp Ori: QDY73135.1 Feature: domain Description: FhuD Location: 1584173-1584938 bp Feature: domain Description: FhuD Location: 1 5841 73-1 584938 bp Feature: gene Location: 1585138-1586502 bp Ori: QDY73136.1 Feature: domain Description: UPF0236 Location: 1585144-1586500 bp Feature: domain Description: UPF0236 Location: 1 5851 44-1 586500 bp Feature: gene Location: 1724567-1724752 bp Feature: gene Location: 1724920-1725118 bp Feature: gene Location: 1725051-1726310 bp Ori: QDY73272.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1725249-1725867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 725249-1 725867 bp Feature: domain Description: GIIM Note: maturase Location: 1725915-1726128 bp Feature: domain Description: GIIM Note: maturase Location: 1 72591 5-1 7261 28 bp Feature: gene Location: 1726385-1727677 bp Ori: QDY73273.1 Feature: domain Description: BaeS Location: 1726862-1727648 bp Feature: domain Description: BaeS Location: 1 726862-1 727648 bp Feature: gene Location: 1727718-1727984 bp Ori: QDY75052.1 Feature: domain Description: MFS_FsR Location: 1727805-1727901 bp Feature: domain Description: MFS_FsR Location: 1 727805-1 727901 bp Feature: gene Location: 1948514-1949017 bp Ori: QDY73476.1 Feature: domain Description: YdjM Location: 1948529-1948961 bp Feature: domain Description: YdjM Location: 1 948529-1 948961 bp Feature: gene Location: 1949189-1952587 bp Feature: domain Description: narG Location: 1949207-1952588 bp Feature: domain Description: narG Location: 1 949207-1 952588 bp Feature: gene Location: 1952657-1953916 bp Ori: QDY73477.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1952855-1953473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 952855-1 953473 bp Feature: domain Description: GIIM Note: maturase Location: 1953521-1953734 bp Feature: domain Description: GIIM Note: maturase Location: 1 953521 -1 953734 bp Feature: gene Location: 1954215-1954400 bp Feature: gene Location: 1954475-1954762 bp Feature: domain Description: narG Location: 1954478-1954757 bp Feature: domain Description: narG Location: 1 954478-1 954757 bp Feature: gene Location: 2606845-2607870 bp Ori: QDY74088.1 Gene: ytvI Feature: domain Description: spore_ytvI Location: 2606860-2607850 bp Feature: domain Description: spore_ytvI Location: 2606860-2607850 bp Feature: gene Location: 2607951-2608562 bp Ori: QDY74089.1 Feature: domain Description: DedA Location: 2607975-2608539 bp Feature: domain Description: DedA Location: 2607975-2608539 bp Feature: gene Location: 2608706-2609965 bp Ori: QDY74090.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608904-2609522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608904-2609522 bp Feature: domain Description: GIIM Note: maturase Location: 2609570-2609783 bp Feature: domain Description: GIIM Note: maturase Location: 2609570-2609783 bp Feature: gene Location: 2609898-2610096 bp Feature: gene Location: 2610264-2610449 bp Feature: gene Location: 3154765-3155721 bp Ori: QDY74594.1 Gene: trxB Feature: domain Description: TRX_reduct Location: 3154789-3155680 bp Feature: domain Description: TRX_reduct Location: 31 54789-31 55680 bp Feature: gene Location: 3155797-3156450 bp Feature: domain Description: HTH_psq Location: 3156319-3156427 bp Feature: domain Description: HTH_psq Location: 31 5631 9-31 56427 bp Feature: gene Location: 3156525-3157784 bp Ori: QDY74595.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3156723-3157341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 56723-31 57341 bp Feature: domain Description: GIIM Note: maturase Location: 3157389-3157602 bp Feature: domain Description: GIIM Note: maturase Location: 31 57389-31 57602 bp Feature: gene Location: 3157717-3157915 bp Feature: gene Location: 3158083-3158268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), AlsT (COG1115), TMR_SDR_a (cd05269), YjzC (pfam14168), chaperone_ClpB (TIGR03346), RsgI_N (pfam12791), SASP (pfam00269), PBP2_UgpB (cd14748)
PRK00549 (competence damage-inducible protein A; Provisional), recA (PRK09519), HNHc (smart00507), RNase_Y (TIGR03319), CspC (COG1278), FhuD (cd01146), UPF0236 (pfam06782), BaeS (COG0642), MFS_FsR (cd17478), YdjM (pfam04307)
narG (TIGR01580), spore_ytvI (TIGR02872), DedA (COG0586), TRX_reduct (TIGR01292), HTH_psq (pfam05225)