myRT

myRT report for GCA_007917315.1_ASM791731v1

Download annotations/find similar RTs

Seq: CP041270.1 Enterococcus faecium strain VVEswe-S chromosome, complete genome (2851769 bp)
Overview 1 RT 1: 1831393-1837465 bp 2 RT 2: 2726387-2731190 bp Neighborhood of RT #1 [1831393, 1837467] AAA_10 RVT-GII DDE_Tnp_1_3 AAA_10 Neighborhood of RT #2 [2726387, 2731204] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc ArdA Feature: gene Location: 1831393-1832232 bp Feature: domain Description: AAA_10 Location: 1831399-1832218 bp Feature: domain Description: AAA_1 0 Location: 1 831 399-1 83221 8 bp Feature: gene Location: 1832236-1832322 bp Feature: gene Location: 1832345-1834171 bp Ori: QDZ47975.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1832645-1833344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 832645-1 833344 bp Feature: gene Location: 1834569-1835477 bp Ori: QDZ47976.1 Feature: domain Description: DDE_Tnp_1_3 Location: 1834923-1835340 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 1 834923-1 835340 bp Feature: gene Location: 1835965-1837467 bp Feature: domain Description: AAA_10 Location: 1837294-1837465 bp Feature: domain Description: AAA_1 0 Location: 1 837294-1 837465 bp Feature: gene Location: 2726387-2727571 bp Ori: QDZ48774.1 Feature: domain Description: HTH_XRE Location: 2726417-2726561 bp Feature: domain Description: HTH_XRE Location: 272641 7-2726561 bp Feature: domain Description: Rol_Rep_N Location: 2726594-2726858 bp Feature: domain Description: Rol_Rep_N Location: 2726594-2726858 bp Feature: domain Description: Rep_trans Location: 2726882-2727494 bp Feature: domain Description: Rep_trans Location: 2726882-2727494 bp Feature: gene Location: 2727568-2727705 bp Ori: QDZ48775.1 Feature: domain Description: DUF3789 Location: 2727595-2727688 bp Feature: domain Description: DUF3789 Location: 2727595-2727688 bp Feature: gene Location: 2728450-2730360 bp Ori: QDZ48776.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728783-2729521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728783-2729521 bp Feature: domain Description: HNHc Note: nucleases Location: 2730076-2730241 bp Feature: domain Description: HNHc Note: nucleases Location: 2730076-2730241 bp Feature: gene Location: 2730464-2730688 bp Feature: gene Location: 2730701-2731204 bp Ori: QDZ48777.1 Feature: domain Description: ArdA Location: 2730719-2731190 bp Feature: domain Description: ArdA Location: 273071 9-2731 1 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, DDE_Tnp_1_3 (pfam13612), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), DUF3789 (pfam12664), HNHc (smart00507), ArdA (pfam07275)

Seq: CP041272.1 Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2 (89798 bp)
Overview 1 RT 1: 76778-83206 bp Neighborhood of RT #1 [76778, 83206] RVT-GII PolY_Pol_V_umuC Feature: gene Location: 76778-78004 bp Feature: gene Location: 79287-79512 bp Feature: gene Location: 79627-81489 bp Ori: QDZ49229.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79936-80674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79936-80674 bp Feature: gene Location: 81571-82866 bp Ori: QDZ49230.1 Feature: domain Description: PolY_Pol_V_umuC Location: 81610-82645 bp Feature: domain Description: PolY_Pol_V_umuC Location: 81610-82 645 bp Feature: gene Location: 82859-83206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PolY_Pol_V_umuC (cd01700)

Seq: CP041273.1 Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S3, complete sequence (65253 bp)
Overview 1 RT 1: 49811-55121 bp Neighborhood of RT #1 [49811, 55121] PinE RVT-GII PolY_Pol_V_umuC Feature: gene Location: 49811-50395 bp Ori: QDZ49297.1 Feature: domain Description: PinE Location: 49817-50378 bp Feature: domain Description: PinE Location: 49817-503 78 bp Feature: gene Location: 51199-51424 bp Feature: gene Location: 51539-53401 bp Ori: QDZ49298.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51848-52586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51848-52586 bp Feature: gene Location: 53483-54778 bp Ori: QDZ49299.1 Feature: domain Description: PolY_Pol_V_umuC Location: 53522-54557 bp Feature: domain Description: PolY_Pol_V_umuC Location: 53 522-54557 bp Feature: gene Location: 54771-55121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PolY_Pol_V_umuC (cd01700)