myRT

myRT report for GCA_007922655.1_ASM792265v1

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Seq: CP041624.1 Escherichia coli O157:H7 strain ATCC 43888 plasmid pO157_like, complete sequence (95081 bp)
Overview 1 RT 1: 35694-39265 bp Neighborhood of RT #1 [35694, 39265] RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 35694-35990 bp Feature: gene Location: 36017-36231 bp Feature: gene Location: 36253-37977 bp Ori: QDZ57868.1 Gene: ltrA Feature: domain Description: RVT_N Location: 36310-36547 bp Feature: domain Description: RVT_N Location: 3631 0-36547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36598-37246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36598-37246 bp Feature: domain Description: YkfC Location: 37378-37534 bp Feature: domain Description: YkfC Location: 37378-37534 bp Feature: domain Description: HNHc Note: nucleases Location: 37762-37921 bp Feature: domain Description: HNHc Note: nucleases Location: 37762-37921 bp Feature: gene Location: 38054-38956 bp Ori: QDZ57869.1 Feature: domain Description: DUF1281 Location: 38123-38651 bp Feature: domain Description: DUF1 281 Location: 381 23-38651 bp Feature: domain Description: DUF1281_C Location: 38657-38885 bp Feature: domain Description: DUF1 281 _C Location: 38657-38885 bp Feature: gene Location: 38960-39265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: CP041623.1 Escherichia coli O157:H7 strain ATCC 43888 chromosome, complete genome (5375715 bp)
Overview 1 RT 1: 3452453-3455673 bp Neighborhood of RT #1 [3452453, 3455673] Minor_tail_Z Phage_tail_U RVT_N RVT-GII YkfC HNHc Feature: gene Location: 3452453-3453031 bp Ori: QDZ55855.1 Feature: domain Description: Minor_tail_Z Location: 3452462-3453029 bp Feature: domain Description: Minor_tail_Z Location: 3452 462 -345302 9 bp Feature: gene Location: 3453028-3453357 bp Ori: QDZ55856.1 Feature: domain Description: Phage_tail_U Location: 3453031-3453319 bp Feature: domain Description: Phage_tail_U Location: 3453031-3453319 bp Feature: gene Location: 3453390-3455114 bp Ori: QDZ55857.1 Gene: ltrA Feature: domain Description: RVT_N Location: 3453447-3453684 bp Feature: domain Description: RVT_N Location: 3453447-3453684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3453735-3454383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3453735-3454383 bp Feature: domain Description: YkfC Location: 3454515-3454671 bp Feature: domain Description: YkfC Location: 3454515-3454671 bp Feature: domain Description: HNHc Note: nucleases Location: 3454899-3455058 bp Feature: domain Description: HNHc Note: nucleases Location: 3454899-3455058 bp Feature: gene Location: 3455136-3455350 bp Feature: gene Location: 3455377-3455673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Minor_tail_Z (pfam06763), Phage_tail_U (pfam06141), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)