myRT

myRT report for GCA_007954405.1_ASM795440v1

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Seq: CP042344.1 Comamonas sp. NLF 7-7 chromosome, complete genome (3333437 bp)
Overview 1 RT 1: 855881-860771 bp 2 RT 2: 2310239-2313055 bp Neighborhood of RT #1 [855881, 860878] DUF2958 RVT_N RVT-GII GIIM ICE_VC0181 Prok-E2_B ThiF Neighborhood of RT #2 [2310239, 2313258] RelE YiaG RVT-GII RVT_1 Phage_AlpA Replicase PriCT_1 Feature: gene Location: 855881-856231 bp Ori: QEA12314.1 Feature: domain Description: DUF2958 Location: 855896-856226 bp Feature: domain Description: DUF2958 Location: 855896-856226 bp Feature: gene Location: 856704-856893 bp Feature: gene Location: 856977-858476 bp Ori: QEA12315.1 Gene: ltrA Feature: domain Description: RVT_N Location: 857040-857274 bp Feature: domain Description: RVT_N Location: 857040-857274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857328-857970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857328-857970 bp Feature: domain Description: GIIM Note: maturase Location: 858021-858255 bp Feature: domain Description: GIIM Note: maturase Location: 858021 -858255 bp Feature: gene Location: 858783-859259 bp Ori: QEA12316.1 Feature: domain Description: ICE_VC0181 Location: 858876-859209 bp Feature: domain Description: ICE_VC01 81 Location: 858876-859209 bp Feature: gene Location: 859247-860878 bp Ori: QEA12317.1 Feature: domain Description: Prok-E2_B Location: 859391-859652 bp Feature: domain Description: Prok-E2_B Location: 859391 -859652 bp Feature: domain Description: ThiF Location: 860162-860771 bp Feature: domain Description: ThiF Location: 8601 62-860771 bp Feature: gene Location: 2310239-2310610 bp Ori: QEA13538.1 Feature: domain Description: RelE Location: 2310245-2310602 bp Feature: domain Description: RelE Location: 231 0245-231 0602 bp Feature: gene Location: 2310607-2310924 bp Ori: QEA13539.1 Feature: domain Description: YiaG Location: 2310616-2310916 bp Feature: domain Description: YiaG Location: 231 061 6-231 091 6 bp Feature: gene Location: 2310938-2311800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2311103-2311202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 1 1 03-231 1 202 bp Feature: domain Description: RVT_1 Location: 2311295-2311349 bp Feature: domain Description: RVT_1 Location: 231 1 295-231 1 349 bp Feature: gene Location: 2312030-2312251 bp Ori: QEA13540.1 Feature: domain Description: Phage_AlpA Location: 2312063-2312198 bp Feature: domain Description: Phage_AlpA Location: 231 2063-231 21 98 bp Feature: gene Location: 2312467-2313258 bp Ori: QEA13541.1 Feature: domain Description: Replicase Location: 2312470-2312818 bp Feature: domain Description: Replicase Location: 231 2470-231 281 8 bp Feature: domain Description: PriCT_1 Location: 2312854-2313055 bp Feature: domain Description: PriCT_1 Location: 231 2854-231 3055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2958 (pfam11171), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ICE_VC0181 (TIGR02256), Prok-E2_B (pfam14461), ThiF (pfam00899), RelE (pfam06296), YiaG (COG2944), RVT_1 (pfam00078)
Phage_AlpA (pfam05930), Replicase (pfam03090), PriCT_1 (smart00942)