myRT

myRT report for GCA_007963885.1_ASM796388v1

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Seq: CP017540.1 Mannheimia haemolytica strain 1451, complete genome (2641287 bp)
Overview 1 RT 1: 1480498-1486266 bp 2 RT 2: 2450822-2459811 bp Neighborhood of RT #1 [1480498, 1486268] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2450822, 2459811] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1480498-1481061 bp Feature: gene Location: 1481061-1481837 bp Ori: QEB04877.1 Feature: domain Description: YaaA Location: 1481064-1481832 bp Feature: domain Description: YaaA Location: 1 481 064-1 481 832 bp Feature: gene Location: 1482026-1483689 bp Feature: domain Description: RVT_N Location: 1482038-1482281 bp Feature: domain Description: RVT_N Location: 1 482038-1 482281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1482326-1482986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 482326-1 482986 bp Feature: gene Location: 1485428-1485823 bp Ori: QEB04878.1 Feature: domain Description: rpsI Location: 1485440-1485821 bp Feature: domain Description: rpsI Location: 1 485440-1 485821 bp Feature: gene Location: 1485840-1486268 bp Ori: QEB04879.1 Feature: domain Description: rplM Location: 1485843-1486266 bp Feature: domain Description: rplM Location: 1 485843-1 486266 bp Feature: gene Location: 2450822-2451886 bp Ori: QEB05773.1 Feature: domain Description: ECA_wecA Location: 2450834-2451851 bp Feature: domain Description: ECA_wecA Location: 2450834-2451 851 bp Feature: gene Location: 2452028-2453308 bp Ori: QEB05774.1 Feature: domain Description: PRK00062 Location: 2452034-2453303 bp Feature: domain Description: PRK00062 Location: 2452034-2453303 bp Feature: gene Location: 2453560-2454870 bp Ori: QEB05775.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2453755-2454574 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2453755-2454574 bp Feature: gene Location: 2455265-2459548 bp Ori: QEB05776.1 Feature: domain Description: PRK00566 Location: 2455301-2459390 bp Feature: domain Description: PRK00566 Location: 2455301 -2459390 bp Feature: gene Location: 2459620-2459811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)