myRT

myRT report for GCA_007964065.1_ASM796406v1

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Seq: CP017541.1 Mannheimia haemolytica strain 1450, complete genome (2713886 bp)
Overview 1 RT 1: 1407328-1413098 bp 2 RT 2: 2580395-2589384 bp Neighborhood of RT #1 [1407328, 1413098] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2580395, 2589384] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1407328-1407756 bp Ori: QEB02208.1 Feature: domain Description: rplM Location: 1407331-1407754 bp Feature: domain Description: rplM Location: 1 407331 -1 407754 bp Feature: gene Location: 1407773-1408168 bp Ori: QEB02209.1 Feature: domain Description: rpsI Location: 1407785-1408166 bp Feature: domain Description: rpsI Location: 1 407785-1 4081 66 bp Feature: gene Location: 1409907-1411570 bp Feature: domain Description: RVT_N Location: 1409919-1410162 bp Feature: domain Description: RVT_N Location: 1 40991 9-1 41 01 62 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410207-1410867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 0207-1 41 0867 bp Feature: gene Location: 1411759-1412535 bp Ori: QEB02210.1 Feature: domain Description: YaaA Location: 1411762-1412530 bp Feature: domain Description: YaaA Location: 1 41 1 762-1 41 2530 bp Feature: gene Location: 1412535-1413098 bp Feature: gene Location: 2580395-2581459 bp Ori: QEB03294.1 Feature: domain Description: ECA_wecA Location: 2580407-2581424 bp Feature: domain Description: ECA_wecA Location: 2580407-2581 424 bp Feature: gene Location: 2581601-2582881 bp Ori: QEB03295.1 Feature: domain Description: PRK00062 Location: 2581607-2582876 bp Feature: domain Description: PRK00062 Location: 2581 607-2582876 bp Feature: gene Location: 2583133-2584443 bp Ori: QEB03296.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2583328-2584147 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2583328-25841 47 bp Feature: gene Location: 2584838-2589121 bp Ori: QEB03297.1 Feature: domain Description: PRK00566 Location: 2584874-2588963 bp Feature: domain Description: PRK00566 Location: 2584874-2588963 bp Feature: gene Location: 2589193-2589384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)