myRT

myRT report for GCA_007964225.1_ASM796422v1

Download annotations/find similar RTs

Seq: CP017542.1 Mannheimia haemolytica strain 1405, complete genome (2708096 bp)
Overview 1 RT 1: 1522729-1528497 bp 2 RT 2: 2574569-2583558 bp Neighborhood of RT #1 [1522729, 1528499] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2574569, 2583558] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1522729-1523292 bp Feature: gene Location: 1523292-1524068 bp Ori: QEA99697.1 Feature: domain Description: YaaA Location: 1523295-1524063 bp Feature: domain Description: YaaA Location: 1 523295-1 524063 bp Feature: gene Location: 1524257-1525920 bp Feature: domain Description: RVT_N Location: 1524269-1524512 bp Feature: domain Description: RVT_N Location: 1 524269-1 52451 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1524557-1525217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 524557-1 52521 7 bp Feature: gene Location: 1527659-1528054 bp Ori: QEA99698.1 Feature: domain Description: rpsI Location: 1527671-1528052 bp Feature: domain Description: rpsI Location: 1 527671 -1 528052 bp Feature: gene Location: 1528071-1528499 bp Ori: QEA99699.1 Feature: domain Description: rplM Location: 1528074-1528497 bp Feature: domain Description: rplM Location: 1 528074-1 528497 bp Feature: gene Location: 2574569-2575633 bp Ori: QEB00676.1 Feature: domain Description: ECA_wecA Location: 2574581-2575598 bp Feature: domain Description: ECA_wecA Location: 2574581 -2575598 bp Feature: gene Location: 2575775-2577055 bp Ori: QEB00677.1 Feature: domain Description: PRK00062 Location: 2575781-2577050 bp Feature: domain Description: PRK00062 Location: 2575781 -2577050 bp Feature: gene Location: 2577307-2578617 bp Ori: QEB00678.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2577502-2578321 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2577502-2578321 bp Feature: gene Location: 2579012-2583295 bp Ori: QEB00679.1 Feature: domain Description: PRK00566 Location: 2579048-2583137 bp Feature: domain Description: PRK00566 Location: 2579048-25831 37 bp Feature: gene Location: 2583367-2583558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)