myRT

myRT report for GCA_007964465.1_ASM796446v1

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Seq: CP017543.1 Mannheimia haemolytica strain 1383, complete genome (2699555 bp)
Overview 1 RT 1: 1240955-1246725 bp 2 RT 2: 2509154-2518143 bp Neighborhood of RT #1 [1240955, 1246725] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2509154, 2518143] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1240955-1241383 bp Ori: QEA96865.1 Feature: domain Description: rplM Location: 1240958-1241381 bp Feature: domain Description: rplM Location: 1 240958-1 241 381 bp Feature: gene Location: 1241400-1241795 bp Ori: QEA96866.1 Feature: domain Description: rpsI Location: 1241412-1241793 bp Feature: domain Description: rpsI Location: 1 241 41 2-1 241 793 bp Feature: gene Location: 1243534-1245197 bp Feature: domain Description: RVT_N Location: 1243546-1243789 bp Feature: domain Description: RVT_N Location: 1 243546-1 243789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243834-1244494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 243834-1 244494 bp Feature: gene Location: 1245386-1246162 bp Ori: QEA96867.1 Feature: domain Description: YaaA Location: 1245389-1246157 bp Feature: domain Description: YaaA Location: 1 245389-1 2461 57 bp Feature: gene Location: 1246162-1246725 bp Feature: gene Location: 2509154-2510218 bp Ori: QEA98030.1 Feature: domain Description: ECA_wecA Location: 2509166-2510183 bp Feature: domain Description: ECA_wecA Location: 25091 66-251 01 83 bp Feature: gene Location: 2510360-2511640 bp Ori: QEA98031.1 Feature: domain Description: PRK00062 Location: 2510366-2511635 bp Feature: domain Description: PRK00062 Location: 251 0366-251 1 635 bp Feature: gene Location: 2511892-2513202 bp Ori: QEA98032.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2512087-2512906 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 251 2087-251 2906 bp Feature: gene Location: 2513597-2517880 bp Ori: QEA98033.1 Feature: domain Description: PRK00566 Location: 2513633-2517722 bp Feature: domain Description: PRK00566 Location: 251 3633-251 7722 bp Feature: gene Location: 2517952-2518143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)