myRT

myRT report for GCA_007964925.1_ASM796492v1

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Seq: CP017546.1 Mannheimia haemolytica strain 1342 chromosome, complete genome (2700997 bp)
Overview 1 RT 1: 1522709-1528477 bp 2 RT 2: 2569561-2578550 bp Neighborhood of RT #1 [1522709, 1528479] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2569561, 2578550] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1522709-1523272 bp Feature: gene Location: 1523272-1524048 bp Ori: QEA89313.1 Feature: domain Description: YaaA Location: 1523275-1524043 bp Feature: domain Description: YaaA Location: 1 523275-1 524043 bp Feature: gene Location: 1524237-1525900 bp Feature: domain Description: RVT_N Location: 1524249-1524492 bp Feature: domain Description: RVT_N Location: 1 524249-1 524492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1524537-1525197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 524537-1 5251 97 bp Feature: gene Location: 1527639-1528034 bp Ori: QEA89314.1 Feature: domain Description: rpsI Location: 1527651-1528032 bp Feature: domain Description: rpsI Location: 1 527651 -1 528032 bp Feature: gene Location: 1528051-1528479 bp Ori: QEA89315.1 Feature: domain Description: rplM Location: 1528054-1528477 bp Feature: domain Description: rplM Location: 1 528054-1 528477 bp Feature: gene Location: 2569561-2570625 bp Ori: QEA90285.1 Feature: domain Description: ECA_wecA Location: 2569573-2570590 bp Feature: domain Description: ECA_wecA Location: 2569573-2570590 bp Feature: gene Location: 2570767-2572047 bp Ori: QEA90286.1 Feature: domain Description: PRK00062 Location: 2570773-2572042 bp Feature: domain Description: PRK00062 Location: 2570773-2572042 bp Feature: gene Location: 2572299-2573609 bp Ori: QEA90287.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2572494-2573313 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2572494-257331 3 bp Feature: gene Location: 2574004-2578287 bp Ori: QEA90288.1 Feature: domain Description: PRK00566 Location: 2574040-2578129 bp Feature: domain Description: PRK00566 Location: 2574040-25781 29 bp Feature: gene Location: 2578359-2578550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)