myRT

myRT report for GCA_007965355.1_ASM796535v1

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Seq: CP017548.1 Mannheimia haemolytica strain 1319 chromosome, complete genome (2788085 bp)
Overview 1 RT 1: 1375698-1381466 bp 2 RT 2: 2597660-2606649 bp Neighborhood of RT #1 [1375698, 1381468] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2597660, 2606649] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1375698-1376261 bp Feature: gene Location: 1376261-1377037 bp Ori: QEA83941.1 Feature: domain Description: YaaA Location: 1376264-1377032 bp Feature: domain Description: YaaA Location: 1 376264-1 377032 bp Feature: gene Location: 1377226-1378889 bp Feature: domain Description: RVT_N Location: 1377238-1377481 bp Feature: domain Description: RVT_N Location: 1 377238-1 377481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377526-1378186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 377526-1 3781 86 bp Feature: gene Location: 1380628-1381023 bp Ori: QEA83942.1 Feature: domain Description: rpsI Location: 1380640-1381021 bp Feature: domain Description: rpsI Location: 1 380640-1 381 021 bp Feature: gene Location: 1381040-1381468 bp Ori: QEA83943.1 Feature: domain Description: rplM Location: 1381043-1381466 bp Feature: domain Description: rplM Location: 1 381 043-1 381 466 bp Feature: gene Location: 2597660-2598724 bp Ori: QEA85084.1 Feature: domain Description: ECA_wecA Location: 2597672-2598689 bp Feature: domain Description: ECA_wecA Location: 2597672-2598689 bp Feature: gene Location: 2598866-2600146 bp Ori: QEA85085.1 Feature: domain Description: PRK00062 Location: 2598872-2600141 bp Feature: domain Description: PRK00062 Location: 2598872-26001 41 bp Feature: gene Location: 2600398-2601708 bp Ori: QEA85086.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2600593-2601412 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2600593-2601 41 2 bp Feature: gene Location: 2602103-2606386 bp Ori: QEA85087.1 Feature: domain Description: PRK00566 Location: 2602139-2606228 bp Feature: domain Description: PRK00566 Location: 26021 39-2606228 bp Feature: gene Location: 2606458-2606649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)