myRT

myRT report for GCA_007965585.1_ASM796558v1

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Seq: CP017549.1 Mannheimia haemolytica strain 1318 chromosome, complete genome (2691220 bp)
Overview 1 RT 1: 1478142-1483910 bp 2 RT 2: 2499809-2508798 bp Neighborhood of RT #1 [1478142, 1483912] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2499809, 2508798] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1478142-1478705 bp Feature: gene Location: 1478705-1479481 bp Ori: QEA81428.1 Feature: domain Description: YaaA Location: 1478708-1479476 bp Feature: domain Description: YaaA Location: 1 478708-1 479476 bp Feature: gene Location: 1479670-1481333 bp Feature: domain Description: RVT_N Location: 1479682-1479925 bp Feature: domain Description: RVT_N Location: 1 479682-1 479925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1479970-1480630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 479970-1 480630 bp Feature: gene Location: 1483072-1483467 bp Ori: QEA81429.1 Feature: domain Description: rpsI Location: 1483084-1483465 bp Feature: domain Description: rpsI Location: 1 483084-1 483465 bp Feature: gene Location: 1483484-1483912 bp Ori: QEA81430.1 Feature: domain Description: rplM Location: 1483487-1483910 bp Feature: domain Description: rplM Location: 1 483487-1 48391 0 bp Feature: gene Location: 2499809-2500873 bp Ori: QEA82388.1 Feature: domain Description: ECA_wecA Location: 2499821-2500838 bp Feature: domain Description: ECA_wecA Location: 2499821 -2500838 bp Feature: gene Location: 2501015-2502295 bp Ori: QEA82389.1 Feature: domain Description: PRK00062 Location: 2501021-2502290 bp Feature: domain Description: PRK00062 Location: 2501 021 -2502290 bp Feature: gene Location: 2502547-2503857 bp Ori: QEA82390.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2502742-2503561 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2502742-2503561 bp Feature: gene Location: 2504252-2508535 bp Ori: QEA82391.1 Feature: domain Description: PRK00566 Location: 2504288-2508377 bp Feature: domain Description: PRK00566 Location: 2504288-2508377 bp Feature: gene Location: 2508607-2508798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)