myRT

myRT report for GCA_007965745.1_ASM796574v1

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Seq: CP017550.1 Mannheimia haemolytica strain 1309 chromosome, complete genome (2746074 bp)
Overview 1 RT 1: 1626509-1632279 bp 2 RT 2: 2555649-2564638 bp Neighborhood of RT #1 [1626509, 1632279] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2555649, 2564638] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1626509-1626937 bp Ori: QEA78956.1 Feature: domain Description: rplM Location: 1626512-1626935 bp Feature: domain Description: rplM Location: 1 62651 2-1 626935 bp Feature: gene Location: 1626954-1627349 bp Ori: QEA78957.1 Feature: domain Description: rpsI Location: 1626966-1627347 bp Feature: domain Description: rpsI Location: 1 626966-1 627347 bp Feature: gene Location: 1629088-1630751 bp Feature: domain Description: RVT_N Location: 1629100-1629343 bp Feature: domain Description: RVT_N Location: 1 6291 00-1 629343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629388-1630048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 629388-1 630048 bp Feature: gene Location: 1630940-1631716 bp Ori: QEA78958.1 Feature: domain Description: YaaA Location: 1630943-1631711 bp Feature: domain Description: YaaA Location: 1 630943-1 631 71 1 bp Feature: gene Location: 1631716-1632279 bp Feature: gene Location: 2555649-2556713 bp Ori: QEA79817.1 Feature: domain Description: ECA_wecA Location: 2555661-2556678 bp Feature: domain Description: ECA_wecA Location: 2555661 -2556678 bp Feature: gene Location: 2556855-2558135 bp Ori: QEA79818.1 Feature: domain Description: PRK00062 Location: 2556861-2558130 bp Feature: domain Description: PRK00062 Location: 2556861 -25581 30 bp Feature: gene Location: 2558387-2559697 bp Ori: QEA79819.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2558582-2559401 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2558582-2559401 bp Feature: gene Location: 2560092-2564375 bp Ori: QEA79820.1 Feature: domain Description: PRK00566 Location: 2560128-2564217 bp Feature: domain Description: PRK00566 Location: 25601 28-256421 7 bp Feature: gene Location: 2564447-2564638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)