myRT

myRT report for GCA_007965905.1_ASM796590v1

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Seq: CP017551.1 Mannheimia haemolytica strain 1287 chromosome, complete genome (2749831 bp)
Overview 1 RT 1: 1269438-1275208 bp 2 RT 2: 2559354-2568343 bp Neighborhood of RT #1 [1269438, 1275208] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2559354, 2568343] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1269438-1269866 bp Ori: QEA75988.1 Feature: domain Description: rplM Location: 1269441-1269864 bp Feature: domain Description: rplM Location: 1 269441 -1 269864 bp Feature: gene Location: 1269883-1270278 bp Ori: QEA75989.1 Feature: domain Description: rpsI Location: 1269895-1270276 bp Feature: domain Description: rpsI Location: 1 269895-1 270276 bp Feature: gene Location: 1272017-1273680 bp Feature: domain Description: RVT_N Location: 1272029-1272272 bp Feature: domain Description: RVT_N Location: 1 272029-1 272272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272317-1272977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27231 7-1 272977 bp Feature: gene Location: 1273869-1274645 bp Ori: QEA75990.1 Feature: domain Description: YaaA Location: 1273872-1274640 bp Feature: domain Description: YaaA Location: 1 273872-1 274640 bp Feature: gene Location: 1274645-1275208 bp Feature: gene Location: 2559354-2560418 bp Ori: QEA77170.1 Feature: domain Description: ECA_wecA Location: 2559366-2560383 bp Feature: domain Description: ECA_wecA Location: 2559366-2560383 bp Feature: gene Location: 2560560-2561840 bp Ori: QEA77171.1 Feature: domain Description: PRK00062 Location: 2560566-2561835 bp Feature: domain Description: PRK00062 Location: 2560566-2561 835 bp Feature: gene Location: 2562092-2563402 bp Ori: QEA77172.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2562287-2563106 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2562287-25631 06 bp Feature: gene Location: 2563797-2568080 bp Ori: QEA77173.1 Feature: domain Description: PRK00566 Location: 2563833-2567922 bp Feature: domain Description: PRK00566 Location: 2563833-2567922 bp Feature: gene Location: 2568152-2568343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)