myRT

myRT report for GCA_007966105.1_ASM796610v1

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Seq: CP017552.1 Mannheimia haemolytica strain 1282 chromosome, complete genome (2694017 bp)
Overview 1 RT 1: 1497178-1502946 bp 2 RT 2: 2503588-2512577 bp Neighborhood of RT #1 [1497178, 1502948] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2503588, 2512577] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1497178-1497741 bp Feature: gene Location: 1497741-1498517 bp Ori: QEA73587.1 Feature: domain Description: YaaA Location: 1497744-1498512 bp Feature: domain Description: YaaA Location: 1 497744-1 49851 2 bp Feature: gene Location: 1498706-1500369 bp Feature: domain Description: RVT_N Location: 1498718-1498961 bp Feature: domain Description: RVT_N Location: 1 49871 8-1 498961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499006-1499666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 499006-1 499666 bp Feature: gene Location: 1502108-1502503 bp Ori: QEA73588.1 Feature: domain Description: rpsI Location: 1502120-1502501 bp Feature: domain Description: rpsI Location: 1 5021 20-1 502501 bp Feature: gene Location: 1502520-1502948 bp Ori: QEA73589.1 Feature: domain Description: rplM Location: 1502523-1502946 bp Feature: domain Description: rplM Location: 1 502523-1 502946 bp Feature: gene Location: 2503588-2504652 bp Ori: QEA74531.1 Feature: domain Description: ECA_wecA Location: 2503600-2504617 bp Feature: domain Description: ECA_wecA Location: 2503600-250461 7 bp Feature: gene Location: 2504794-2506074 bp Ori: QEA74532.1 Feature: domain Description: PRK00062 Location: 2504800-2506069 bp Feature: domain Description: PRK00062 Location: 2504800-2506069 bp Feature: gene Location: 2506326-2507636 bp Ori: QEA74533.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2506521-2507340 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2506521 -2507340 bp Feature: gene Location: 2508031-2512314 bp Ori: QEA74534.1 Feature: domain Description: PRK00566 Location: 2508067-2512156 bp Feature: domain Description: PRK00566 Location: 2508067-251 21 56 bp Feature: gene Location: 2512386-2512577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)