myRT

myRT report for GCA_007970805.1_ASM797080v1

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Seq: CP042433.1 Flavisolibacter ginsenosidimutans strain Gsoil 636 chromosome, complete genome (5079621 bp)
Overview 1 RT 1: 1778166-1786231 bp 2 RT 2: 3489741-3494873 bp Neighborhood of RT #1 [1778166, 1786560] PAS_4 PAS_4 PAS_4 PAS_4 COG4251 RVT-UG2 CarbopepD_reg_2 BtuB Neighborhood of RT #2 [3489741, 3494873] LGIC_ECD_bact LGIC_ECD_bact LGIC_TM_bact RVT-Retrons PAS COG4585 Feature: gene Location: 1778166-1778546 bp Feature: gene Location: 1778619-1781051 bp Ori: QEC55699.1 Feature: domain Description: PAS_4 Location: 1778733-1779048 bp Feature: domain Description: PAS_4 Location: 1 778733-1 779048 bp Feature: domain Description: PAS_4 Location: 1779114-1779453 bp Feature: domain Description: PAS_4 Location: 1 7791 1 4-1 779453 bp Feature: domain Description: PAS_4 Location: 1779552-1779873 bp Feature: domain Description: PAS_4 Location: 1 779552-1 779873 bp Feature: domain Description: PAS_4 Location: 1779939-1780269 bp Feature: domain Description: PAS_4 Location: 1 779939-1 780269 bp Feature: domain Description: COG4251 Location: 1780320-1781049 bp Feature: domain Description: COG4251 Location: 1 780320-1 781 049 bp Feature: gene Location: 1781950-1783515 bp Ori: QEC55700.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1782235-1783144 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 782235-1 7831 44 bp Feature: gene Location: 1783833-1784291 bp Feature: gene Location: 1784353-1786560 bp Ori: QEC55702.1 Feature: domain Description: CarbopepD_reg_2 Location: 1784488-1784710 bp Feature: domain Description: CarbopepD_reg_2 Location: 1 784488-1 78471 0 bp Feature: domain Description: BtuB Location: 1784710-1786231 bp Feature: domain Description: BtuB Location: 1 78471 0-1 786231 bp Feature: gene Location: 3489741-3490700 bp Ori: QEC57101.1 Feature: domain Description: LGIC_ECD_bact Location: 3489825-3490014 bp Feature: domain Description: LGIC_ECD_bact Location: 3489825-349001 4 bp Feature: domain Description: LGIC_ECD_bact Location: 3490029-3490320 bp Feature: domain Description: LGIC_ECD_bact Location: 3490029-3490320 bp Feature: domain Description: LGIC_TM_bact Location: 3490335-3490680 bp Feature: domain Description: LGIC_TM_bact Location: 3490335-3490680 bp Feature: gene Location: 3490886-3491782 bp Feature: gene Location: 3491943-3492947 bp Ori: QEC57103.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3492093-3492639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3492093-3492639 bp Feature: gene Location: 3493383-3494450 bp Ori: QEC57104.1 Feature: domain Description: PAS Location: 3493428-3493644 bp Feature: domain Description: PAS Location: 3493428-3493644 bp Feature: domain Description: COG4585 Location: 3493704-3494388 bp Feature: domain Description: COG4585 Location: 3493704-3494388 bp Feature: gene Location: 3494613-3494873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAS_4 (pfam08448), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), RVT-UG2, CarbopepD_reg_2 (pfam13715), BtuB (COG4206), LGIC_ECD_bact (cd18988), LGIC_TM_bact (cd19050), RVT-Retrons, PAS (smart00091), COG4585 (Signal transduction histidine kinase )