myRT

myRT report for GCA_007971385.1_ASM797138v1

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Seq: CP042434.1 Arachidicoccus ginsenosidivorans strain Gsoil 809 chromosome, complete genome (5773153 bp)
Overview 1 RT 1: 877332-885220 bp 2 RT 2: 1533229-1536401 bp 3 RT 3: 5593390-5599128 bp Neighborhood of RT #1 [877332, 885231] ADOP DDE_Tnp_1 RVT_N RVT-GII GIIM ABC_6TM_TmrB_like PLN02373 Neighborhood of RT #2 [1533229, 1536472] group_II_RT_mat RVT-GII group_II_RT_mat CHU_C Neighborhood of RT #3 [5593390, 5599139] DUF3732 RVT-GII GIIM tspaseT_teng_N CwlO1 CwlO1 Feature: gene Location: 877332-878552 bp Ori: QEC70866.1 Feature: domain Description: ADOP Location: 877356-878511 bp Feature: domain Description: ADOP Location: 877356-87851 1 bp Feature: gene Location: 878642-879823 bp Ori: QEC70867.1 Feature: domain Description: DDE_Tnp_1 Location: 878909-879668 bp Feature: domain Description: DDE_Tnp_1 Location: 878909-879668 bp Feature: gene Location: 880448-882133 bp Ori: QEC74180.1 Gene: ltrA Feature: domain Description: RVT_N Location: 880502-880745 bp Feature: domain Description: RVT_N Location: 880502-880745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880790-881420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880790-881 420 bp Feature: domain Description: GIIM Note: maturase Location: 881486-881717 bp Feature: domain Description: GIIM Note: maturase Location: 881 486-881 71 7 bp Feature: gene Location: 882721-884534 bp Feature: domain Description: ABC_6TM_TmrB_like Location: 882775-883129 bp Feature: domain Description: ABC_6TM_TmrB_like Location: 882775-8831 29 bp Feature: gene Location: 884674-885231 bp Ori: QEC70868.1 Feature: domain Description: PLN02373 Location: 884686-885220 bp Feature: domain Description: PLN02373 Location: 884686-885220 bp Feature: gene Location: 1533229-1533870 bp Feature: gene Location: 1534207-1534770 bp Ori: QEC71341.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1534210-1534528 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 53421 0-1 534528 bp Feature: gene Location: 1534945-1535214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534948-1535212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 534948-1 53521 2 bp Feature: gene Location: 1535347-1535658 bp Ori: QEC71342.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1535515-1535656 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 53551 5-1 535656 bp Feature: gene Location: 1536170-1536472 bp Ori: QEC74203.1 Feature: domain Description: CHU_C Location: 1536194-1536401 bp Feature: domain Description: CHU_C Location: 1 5361 94-1 536401 bp Feature: gene Location: 5593390-5595333 bp Ori: QEC74015.1 Feature: domain Description: DUF3732 Location: 5594758-5595331 bp Feature: domain Description: DUF3732 Location: 5594758-5595331 bp Feature: gene Location: 5595337-5595642 bp Feature: gene Location: 5595716-5597044 bp Ori: QEC74017.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5596001-5596640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5596001 -5596640 bp Feature: domain Description: GIIM Note: maturase Location: 5596709-5596934 bp Feature: domain Description: GIIM Note: maturase Location: 5596709-5596934 bp Feature: gene Location: 5597812-5598228 bp Ori: QEC74018.1 Feature: domain Description: tspaseT_teng_N Location: 5597821-5597968 bp Feature: domain Description: tspaseT_teng_N Location: 5597821 -5597968 bp Feature: gene Location: 5598678-5599139 bp Ori: QEC74019.1 Feature: domain Description: CwlO1 Location: 5598684-5598957 bp Feature: domain Description: CwlO1 Location: 5598684-5598957 bp Feature: domain Description: CwlO1 Location: 5598972-5599128 bp Feature: domain Description: CwlO1 Location: 5598972-55991 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADOP (TIGR03434), DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ABC_6TM_TmrB_like (cd18541), PLN02373 (soluble inorganic pyrophosphatase), group_II_RT_mat (TIGR04416), CHU_C (pfam13585), DUF3732 (pfam12532)
tspaseT_teng_N (TIGR01765), CwlO1 (COG3883)