myRT

myRT report for GCA_007971525.1_ASM797152v1

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Seq: CP042437.1 Mucilaginibacter ginsenosidivorax strain KHI28 chromosome, complete genome (7811413 bp)
Overview 1 RT 1: 242323-247117 bp 2 RT 2: 3470573-3477910 bp Neighborhood of RT #1 [242323, 247117] TrwB_AAD_bind RVT_N RVT-GII GIIM Neighborhood of RT #2 [3470573, 3477954] rpsI rplM RVT-UG3 RVT-UG8 COG3752 DUF1475 Feature: gene Location: 242323-242739 bp Feature: gene Location: 242729-244009 bp Ori: QEC74598.1 Feature: domain Description: TrwB_AAD_bind Location: 242849-243641 bp Feature: domain Description: TrwB_AAD_bind Location: 242849-243641 bp Feature: gene Location: 244131-245801 bp Ori: QEC74599.1 Gene: ltrA Feature: domain Description: RVT_N Location: 244188-244431 bp Feature: domain Description: RVT_N Location: 2441 88-244431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244476-245127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244476-2451 27 bp Feature: domain Description: GIIM Note: maturase Location: 245181-245415 bp Feature: domain Description: GIIM Note: maturase Location: 2451 81 -24541 5 bp Feature: gene Location: 245883-246081 bp Feature: gene Location: 246407-247117 bp Feature: gene Location: 3470573-3470959 bp Ori: QEC77098.1 Gene: rpsI Feature: domain Description: rpsI Location: 3470588-3470957 bp Feature: domain Description: rpsI Location: 3470588-3470957 bp Feature: gene Location: 3470986-3471423 bp Ori: QEC77099.1 Gene: rplM Feature: domain Description: rplM Location: 3471007-3471418 bp Feature: domain Description: rplM Location: 3471 007-3471 41 8 bp Feature: gene Location: 3472706-3474193 bp Ori: QEC77100.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3473195-3473732 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 34731 95-3473732 bp Feature: gene Location: 3474195-3476423 bp Ori: QEC77101.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3474813-3475281 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 347481 3-3475281 bp Feature: gene Location: 3476832-3477566 bp Ori: QEC80500.1 Feature: domain Description: COG3752 Location: 3476838-3477564 bp Feature: domain Description: COG3752 Location: 3476838-3477564 bp Feature: gene Location: 3477619-3477954 bp Ori: QEC77102.1 Feature: domain Description: DUF1475 Location: 3477637-3477910 bp Feature: domain Description: DUF1 475 Location: 3477637-347791 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrwB_AAD_bind (pfam10412), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), rpsI (PRK00132), rplM (PRK09216), RVT-UG3, RVT-UG8, COG3752 (Steroid 5-alpha reductase family enzyme ), DUF1475 (pfam07343)