myRT

myRT report for GCA_007971685.1_ASM797168v1

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Seq: CP042446.1 Wolbachia pipientis strain wMel_N25 chromosome, complete genome (1267781 bp)
Overview 1 RT 1: 47320-49838 bp 2 RT 2: 376189-379545 bp 3 RT 3: 522251-525807 bp 4 RT 4: 632957-635557 bp 5 RT 5: 668647-673240 bp 6 RT 6: 921234-924847 bp 7 RT 7: 950730-955227 bp 8 RT 8: 1086910-1091509 bp Neighborhood of RT #1 [47320, 51019] DUF4096 RVT-GII RVT_N RVT-GII PDDEXK_2 Tnp_DNA_bind Neighborhood of RT #2 [376189, 379742] WPE_wolbac T_den_put_tspse RVT_N RVT-GII GIIM PDDEXK_2 Neighborhood of RT #3 [522251, 525807] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse Neighborhood of RT #4 [632957, 635557] Minor_tail_Z RVT-GII DUF4096 Neighborhood of RT #5 [668647, 673287] PDDEXK_2 RVT_N RVT-GII GIIM PDDEXK_2 PMM_PGM Neighborhood of RT #6 [921234, 924847] DUF4096 DDE_Tnp_1 RVT-GII pcrA Neighborhood of RT #7 [950730, 955229] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse PRK14012 Neighborhood of RT #8 [1086910, 1091706] FbpB T_den_put_tspse RVT_N RVT-GII GIIM PDDEXK_2 Feature: gene Location: 47320-47689 bp Ori: QEC80692.1 Feature: domain Description: DUF4096 Location: 47347-47566 bp Feature: domain Description: DUF4096 Location: 47347-47566 bp Feature: gene Location: 46857-47320 bp Feature: gene Location: 47717-48118 bp Ori: QEC80693.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47765-48080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47765-48080 bp Feature: gene Location: 47976-48759 bp Feature: domain Description: RVT_N Location: 48006-48252 bp Feature: domain Description: RVT_N Location: 48006-48252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48294-48606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48294-48606 bp Feature: gene Location: 49291-49587 bp Feature: domain Description: PDDEXK_2 Location: 49303-49588 bp Feature: domain Description: PDDEXK_2 Location: 49303-49588 bp Feature: gene Location: 49646-51019 bp Feature: domain Description: Tnp_DNA_bind Location: 49667-49838 bp Feature: domain Description: Tnp_DNA_bind Location: 49667-49838 bp Feature: gene Location: 376189-376578 bp Ori: QEC80978.1 Feature: domain Description: WPE_wolbac Location: 376375-376447 bp Feature: domain Description: WPE_wolbac Location: 376375-376447 bp Feature: gene Location: 376585-377325 bp Ori: QEC80979.1 Feature: domain Description: T_den_put_tspse Location: 376711-377317 bp Feature: domain Description: T_den_put_tspse Location: 37671 1 -37731 7 bp Feature: gene Location: 377322-378869 bp Gene: ltrA Feature: domain Description: RVT_N Location: 377373-377610 bp Feature: domain Description: RVT_N Location: 377373-37761 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377661-378312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377661 -37831 2 bp Feature: domain Description: GIIM Note: maturase Location: 378363-378597 bp Feature: domain Description: GIIM Note: maturase Location: 378363-378597 bp Feature: gene Location: 378878-379144 bp Feature: gene Location: 379299-379742 bp Ori: QEC80980.1 Feature: domain Description: PDDEXK_2 Location: 379326-379545 bp Feature: domain Description: PDDEXK_2 Location: 379326-379545 bp Feature: gene Location: 522251-522694 bp Ori: QEC81084.1 Feature: domain Description: PDDEXK_2 Location: 522278-522497 bp Feature: domain Description: PDDEXK_2 Location: 522278-522497 bp Feature: gene Location: 522849-523115 bp Feature: gene Location: 523124-524671 bp Gene: ltrA Feature: domain Description: RVT_N Location: 523175-523412 bp Feature: domain Description: RVT_N Location: 5231 75-52341 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523463-524114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523463-5241 1 4 bp Feature: domain Description: GIIM Note: maturase Location: 524165-524399 bp Feature: domain Description: GIIM Note: maturase Location: 5241 65-524399 bp Feature: gene Location: 524668-525501 bp Ori: QEC81085.1 Feature: domain Description: T_den_put_tspse Location: 524794-525484 bp Feature: domain Description: T_den_put_tspse Location: 524794-525484 bp Feature: gene Location: 525616-525807 bp Feature: gene Location: 632957-633433 bp Feature: gene Location: 633430-633945 bp Ori: QEC81169.1 Feature: domain Description: Minor_tail_Z Location: 633463-633940 bp Feature: domain Description: Minor_tail_Z Location: 633463-633940 bp Feature: gene Location: 634058-634663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634082-634295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634082-634295 bp Feature: gene Location: 634725-635094 bp Ori: QEC81170.1 Feature: domain Description: DUF4096 Location: 634752-634971 bp Feature: domain Description: DUF4096 Location: 634752-634971 bp Feature: gene Location: 635094-635557 bp Feature: gene Location: 668647-669090 bp Ori: QEC81211.1 Feature: domain Description: PDDEXK_2 Location: 668674-668893 bp Feature: domain Description: PDDEXK_2 Location: 668674-668893 bp Feature: gene Location: 669245-669511 bp Feature: gene Location: 669520-671067 bp Ori: QEC81212.1 Gene: ltrA Feature: domain Description: RVT_N Location: 669571-669808 bp Feature: domain Description: RVT_N Location: 669571 -669808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669859-670510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 669859-67051 0 bp Feature: domain Description: GIIM Note: maturase Location: 670561-670795 bp Feature: domain Description: GIIM Note: maturase Location: 670561 -670795 bp Feature: gene Location: 671064-671792 bp Ori: QEC81213.1 Feature: domain Description: PDDEXK_2 Location: 671190-671661 bp Feature: domain Description: PDDEXK_2 Location: 671 1 90-671 661 bp Feature: gene Location: 671899-673287 bp Ori: QEC81214.1 Feature: domain Description: PMM_PGM Location: 671947-673240 bp Feature: domain Description: PMM_PGM Location: 671 947-673240 bp Feature: gene Location: 921234-921437 bp Ori: QEC81419.1 Feature: domain Description: DUF4096 Location: 921252-921432 bp Feature: domain Description: DUF4096 Location: 921 252-921 432 bp Feature: gene Location: 921542-921853 bp Ori: QEC81757.1 Feature: domain Description: DDE_Tnp_1 Location: 921563-921776 bp Feature: domain Description: DDE_Tnp_1 Location: 921 563-921 776 bp Feature: gene Location: 921811-922148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921814-921949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 81 4-921 949 bp Feature: gene Location: 922375-924291 bp Ori: QEC81420.1 Feature: domain Description: pcrA Location: 922387-924271 bp Feature: domain Description: pcrA Location: 922387-924271 bp Feature: gene Location: 924419-924847 bp Feature: gene Location: 950730-951173 bp Ori: QEC81443.1 Feature: domain Description: PDDEXK_2 Location: 950757-950976 bp Feature: domain Description: PDDEXK_2 Location: 950757-950976 bp Feature: gene Location: 951328-951594 bp Feature: gene Location: 951603-953150 bp Ori: QEC81444.1 Gene: ltrA Feature: domain Description: RVT_N Location: 951654-951891 bp Feature: domain Description: RVT_N Location: 951 654-951 891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951942-952593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 942-952593 bp Feature: domain Description: GIIM Note: maturase Location: 952644-952878 bp Feature: domain Description: GIIM Note: maturase Location: 952644-952878 bp Feature: gene Location: 953147-953947 bp Ori: QEC81445.1 Feature: domain Description: T_den_put_tspse Location: 953273-953927 bp Feature: domain Description: T_den_put_tspse Location: 953273-953927 bp Feature: gene Location: 953982-955229 bp Ori: QEC81446.1 Feature: domain Description: PRK14012 Location: 954021-955227 bp Feature: domain Description: PRK1 401 2 Location: 954021 -955227 bp Feature: gene Location: 1086910-1088508 bp Ori: QEC81561.1 Feature: domain Description: FbpB Location: 1086937-1088494 bp Feature: domain Description: FbpB Location: 1 086937-1 088494 bp Feature: gene Location: 1088519-1089289 bp Ori: QEC81562.1 Feature: domain Description: T_den_put_tspse Location: 1088645-1089275 bp Feature: domain Description: T_den_put_tspse Location: 1 088645-1 089275 bp Feature: gene Location: 1089286-1090833 bp Ori: QEC81563.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1089337-1089574 bp Feature: domain Description: RVT_N Location: 1 089337-1 089574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089625-1090276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 089625-1 090276 bp Feature: domain Description: GIIM Note: maturase Location: 1090327-1090561 bp Feature: domain Description: GIIM Note: maturase Location: 1 090327-1 090561 bp Feature: gene Location: 1090842-1091108 bp Feature: gene Location: 1091263-1091706 bp Ori: QEC81564.1 Feature: domain Description: PDDEXK_2 Location: 1091290-1091509 bp Feature: domain Description: PDDEXK_2 Location: 1 091 290-1 091 509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, RVT_N (pfam13655), PDDEXK_2 (pfam12784), Tnp_DNA_bind (pfam14706), WPE_wolbac (TIGR02697), T_den_put_tspse (TIGR01784), GIIM (pfam08388), Minor_tail_Z (pfam06763), PMM_PGM (cd03089)
DDE_Tnp_1 (pfam01609), pcrA (TIGR01073), PRK14012 (IscS subfamily cysteine desulfurase), FbpB (COG1178)