myRT

myRT report for GCA_007972595.1_ASM797259v1

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Seq: CP042444.1 Wolbachia pipientis strain wMel_I23 chromosome, complete genome (1269137 bp)
Overview 1 RT 1: 47321-49839 bp 2 RT 2: 376690-380046 bp 3 RT 3: 522752-526344 bp 4 RT 4: 633494-636094 bp 5 RT 5: 669184-673777 bp 6 RT 6: 921671-925284 bp 7 RT 7: 951167-955664 bp 8 RT 8: 1088266-1092865 bp Neighborhood of RT #1 [47321, 51020] DUF4096 RVT-GII RVT_N RVT-GII PDDEXK_2 Tnp_DNA_bind Neighborhood of RT #2 [376690, 380243] WPE_wolbac T_den_put_tspse RVT_N RVT-GII GIIM PDDEXK_2 Neighborhood of RT #3 [522752, 526344] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse Neighborhood of RT #4 [633494, 636094] Minor_tail_Z RVT-GII DUF4096 Neighborhood of RT #5 [669184, 673824] PDDEXK_2 RVT_N RVT-GII GIIM PDDEXK_2 PMM_PGM Neighborhood of RT #6 [921671, 925284] DUF4096 DDE_Tnp_1 RVT-GII pcrA Neighborhood of RT #7 [951167, 955666] PDDEXK_2 RVT_N RVT-GII GIIM T_den_put_tspse PRK14012 Neighborhood of RT #8 [1088266, 1093062] FbpB T_den_put_tspse RVT_N RVT-GII GIIM PDDEXK_2 Feature: gene Location: 47321-47690 bp Ori: QEC99565.1 Feature: domain Description: DUF4096 Location: 47348-47567 bp Feature: domain Description: DUF4096 Location: 47348-47567 bp Feature: gene Location: 46858-47321 bp Feature: gene Location: 47718-48119 bp Ori: QEC99566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47766-48081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47766-48081 bp Feature: gene Location: 47977-48760 bp Feature: domain Description: RVT_N Location: 48007-48253 bp Feature: domain Description: RVT_N Location: 48007-48253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48295-48607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48295-48607 bp Feature: gene Location: 49292-49588 bp Feature: domain Description: PDDEXK_2 Location: 49304-49589 bp Feature: domain Description: PDDEXK_2 Location: 49304-49589 bp Feature: gene Location: 49647-51020 bp Feature: domain Description: Tnp_DNA_bind Location: 49668-49839 bp Feature: domain Description: Tnp_DNA_bind Location: 49668-49839 bp Feature: gene Location: 376690-377079 bp Ori: QEC99843.1 Feature: domain Description: WPE_wolbac Location: 376876-376948 bp Feature: domain Description: WPE_wolbac Location: 376876-376948 bp Feature: gene Location: 377086-377826 bp Ori: QEC99844.1 Feature: domain Description: T_den_put_tspse Location: 377212-377818 bp Feature: domain Description: T_den_put_tspse Location: 37721 2-37781 8 bp Feature: gene Location: 377823-379370 bp Gene: ltrA Feature: domain Description: RVT_N Location: 377874-378111 bp Feature: domain Description: RVT_N Location: 377874-3781 1 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378162-378813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3781 62-37881 3 bp Feature: domain Description: GIIM Note: maturase Location: 378864-379098 bp Feature: domain Description: GIIM Note: maturase Location: 378864-379098 bp Feature: gene Location: 379379-379645 bp Feature: gene Location: 379800-380243 bp Ori: QEC99845.1 Feature: domain Description: PDDEXK_2 Location: 379827-380046 bp Feature: domain Description: PDDEXK_2 Location: 379827-380046 bp Feature: gene Location: 522752-523195 bp Ori: QEC99944.1 Feature: domain Description: PDDEXK_2 Location: 522779-522998 bp Feature: domain Description: PDDEXK_2 Location: 522779-522998 bp Feature: gene Location: 523350-523616 bp Feature: gene Location: 523625-525172 bp Gene: ltrA Feature: domain Description: RVT_N Location: 523676-523913 bp Feature: domain Description: RVT_N Location: 523676-52391 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523964-524615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523964-52461 5 bp Feature: domain Description: GIIM Note: maturase Location: 524666-524900 bp Feature: domain Description: GIIM Note: maturase Location: 524666-524900 bp Feature: gene Location: 525169-526038 bp Ori: QEC99945.1 Feature: domain Description: T_den_put_tspse Location: 525295-526021 bp Feature: domain Description: T_den_put_tspse Location: 525295-526021 bp Feature: gene Location: 526153-526344 bp Feature: gene Location: 633494-633970 bp Feature: gene Location: 633967-634482 bp Ori: QED00030.1 Feature: domain Description: Minor_tail_Z Location: 634000-634477 bp Feature: domain Description: Minor_tail_Z Location: 634000-634477 bp Feature: gene Location: 634595-635200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634619-634832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63461 9-634832 bp Feature: gene Location: 635262-635631 bp Ori: QED00031.1 Feature: domain Description: DUF4096 Location: 635289-635508 bp Feature: domain Description: DUF4096 Location: 635289-635508 bp Feature: gene Location: 635631-636094 bp Feature: gene Location: 669184-669627 bp Ori: QED00072.1 Feature: domain Description: PDDEXK_2 Location: 669211-669430 bp Feature: domain Description: PDDEXK_2 Location: 66921 1 -669430 bp Feature: gene Location: 669782-670048 bp Feature: gene Location: 670057-671604 bp Ori: QED00073.1 Gene: ltrA Feature: domain Description: RVT_N Location: 670108-670345 bp Feature: domain Description: RVT_N Location: 6701 08-670345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670396-671047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670396-671 047 bp Feature: domain Description: GIIM Note: maturase Location: 671098-671332 bp Feature: domain Description: GIIM Note: maturase Location: 671 098-671 332 bp Feature: gene Location: 671601-672329 bp Ori: QED00074.1 Feature: domain Description: PDDEXK_2 Location: 671727-672198 bp Feature: domain Description: PDDEXK_2 Location: 671 727-6721 98 bp Feature: gene Location: 672436-673824 bp Ori: QED00075.1 Feature: domain Description: PMM_PGM Location: 672484-673777 bp Feature: domain Description: PMM_PGM Location: 672484-673777 bp Feature: gene Location: 921671-921874 bp Ori: QED00277.1 Feature: domain Description: DUF4096 Location: 921689-921869 bp Feature: domain Description: DUF4096 Location: 921 689-921 869 bp Feature: gene Location: 921979-922290 bp Ori: QED00630.1 Feature: domain Description: DDE_Tnp_1 Location: 922000-922213 bp Feature: domain Description: DDE_Tnp_1 Location: 922000-92221 3 bp Feature: gene Location: 922248-922585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922251-922386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922251 -922386 bp Feature: gene Location: 922812-924728 bp Ori: QED00278.1 Feature: domain Description: pcrA Location: 922824-924708 bp Feature: domain Description: pcrA Location: 922824-924708 bp Feature: gene Location: 924856-925284 bp Feature: gene Location: 951167-951610 bp Ori: QED00303.1 Feature: domain Description: PDDEXK_2 Location: 951194-951413 bp Feature: domain Description: PDDEXK_2 Location: 951 1 94-951 41 3 bp Feature: gene Location: 951765-952031 bp Feature: gene Location: 952040-953587 bp Ori: QED00304.1 Gene: ltrA Feature: domain Description: RVT_N Location: 952091-952328 bp Feature: domain Description: RVT_N Location: 952091 -952328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952379-953030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952379-953030 bp Feature: domain Description: GIIM Note: maturase Location: 953081-953315 bp Feature: domain Description: GIIM Note: maturase Location: 953081 -95331 5 bp Feature: gene Location: 953584-954384 bp Ori: QED00305.1 Feature: domain Description: T_den_put_tspse Location: 953710-954364 bp Feature: domain Description: T_den_put_tspse Location: 95371 0-954364 bp Feature: gene Location: 954419-955666 bp Ori: QED00306.1 Feature: domain Description: PRK14012 Location: 954458-955664 bp Feature: domain Description: PRK1 401 2 Location: 954458-955664 bp Feature: gene Location: 1088266-1089864 bp Ori: QED00419.1 Feature: domain Description: FbpB Location: 1088293-1089850 bp Feature: domain Description: FbpB Location: 1 088293-1 089850 bp Feature: gene Location: 1089875-1090645 bp Ori: QED00420.1 Feature: domain Description: T_den_put_tspse Location: 1090001-1090631 bp Feature: domain Description: T_den_put_tspse Location: 1 090001 -1 090631 bp Feature: gene Location: 1090642-1092189 bp Ori: QED00421.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1090693-1090930 bp Feature: domain Description: RVT_N Location: 1 090693-1 090930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1090981-1091632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 090981 -1 091 632 bp Feature: domain Description: GIIM Note: maturase Location: 1091683-1091917 bp Feature: domain Description: GIIM Note: maturase Location: 1 091 683-1 091 91 7 bp Feature: gene Location: 1092198-1092464 bp Feature: gene Location: 1092619-1093062 bp Ori: QED00422.1 Feature: domain Description: PDDEXK_2 Location: 1092646-1092865 bp Feature: domain Description: PDDEXK_2 Location: 1 092646-1 092865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, RVT_N (pfam13655), PDDEXK_2 (pfam12784), Tnp_DNA_bind (pfam14706), WPE_wolbac (TIGR02697), T_den_put_tspse (TIGR01784), GIIM (pfam08388), Minor_tail_Z (pfam06763), PMM_PGM (cd03089)
DDE_Tnp_1 (pfam01609), pcrA (TIGR01073), PRK14012 (IscS subfamily cysteine desulfurase), FbpB (COG1178)