myRT

myRT report for GCA_007974085.1_ASM797408v1

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Seq: CP017491.1 Mannheimia haemolytica strain 38599 chromosome, complete genome (2646006 bp)
Overview 1 RT 1: 1431897-1437665 bp 2 RT 2: 2454541-2463530 bp Neighborhood of RT #1 [1431897, 1437667] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2454541, 2463530] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1431897-1432460 bp Feature: gene Location: 1432460-1433236 bp Ori: QEC26833.1 Feature: domain Description: YaaA Location: 1432463-1433231 bp Feature: domain Description: YaaA Location: 1 432463-1 433231 bp Feature: gene Location: 1433425-1435088 bp Feature: domain Description: RVT_N Location: 1433437-1433680 bp Feature: domain Description: RVT_N Location: 1 433437-1 433680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433725-1434385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 433725-1 434385 bp Feature: gene Location: 1436827-1437222 bp Ori: QEC26834.1 Feature: domain Description: rpsI Location: 1436839-1437220 bp Feature: domain Description: rpsI Location: 1 436839-1 437220 bp Feature: gene Location: 1437239-1437667 bp Ori: QEC26835.1 Feature: domain Description: rplM Location: 1437242-1437665 bp Feature: domain Description: rplM Location: 1 437242-1 437665 bp Feature: gene Location: 2454541-2455605 bp Ori: QEC27796.1 Feature: domain Description: ECA_wecA Location: 2454553-2455570 bp Feature: domain Description: ECA_wecA Location: 2454553-2455570 bp Feature: gene Location: 2455747-2457027 bp Ori: QEC27797.1 Feature: domain Description: PRK00062 Location: 2455753-2457022 bp Feature: domain Description: PRK00062 Location: 2455753-2457022 bp Feature: gene Location: 2457279-2458589 bp Ori: QEC27798.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457474-2458293 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457474-2458293 bp Feature: gene Location: 2458984-2463267 bp Ori: QEC27799.1 Feature: domain Description: PRK00566 Location: 2459020-2463109 bp Feature: domain Description: PRK00566 Location: 2459020-24631 09 bp Feature: gene Location: 2463339-2463530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)