myRT

myRT report for GCA_007975225.1_ASM797522v1

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Seq: CP017501.1 Mannheimia haemolytica strain 33041 chromosome, complete genome (2645998 bp)
Overview 1 RT 1: 1431863-1437631 bp 2 RT 2: 2454533-2463522 bp Neighborhood of RT #1 [1431863, 1437633] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2454533, 2463522] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1431863-1432426 bp Feature: gene Location: 1432426-1433202 bp Ori: QEC02798.1 Feature: domain Description: YaaA Location: 1432429-1433197 bp Feature: domain Description: YaaA Location: 1 432429-1 4331 97 bp Feature: gene Location: 1433391-1435054 bp Feature: domain Description: RVT_N Location: 1433403-1433646 bp Feature: domain Description: RVT_N Location: 1 433403-1 433646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1433691-1434351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 433691 -1 434351 bp Feature: gene Location: 1436793-1437188 bp Ori: QEC02799.1 Feature: domain Description: rpsI Location: 1436805-1437186 bp Feature: domain Description: rpsI Location: 1 436805-1 4371 86 bp Feature: gene Location: 1437205-1437633 bp Ori: QEC02800.1 Feature: domain Description: rplM Location: 1437208-1437631 bp Feature: domain Description: rplM Location: 1 437208-1 437631 bp Feature: gene Location: 2454533-2455597 bp Ori: QEC03763.1 Feature: domain Description: ECA_wecA Location: 2454545-2455562 bp Feature: domain Description: ECA_wecA Location: 2454545-2455562 bp Feature: gene Location: 2455739-2457019 bp Ori: QEC03764.1 Feature: domain Description: PRK00062 Location: 2455745-2457014 bp Feature: domain Description: PRK00062 Location: 2455745-245701 4 bp Feature: gene Location: 2457271-2458581 bp Ori: QEC03765.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457466-2458285 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457466-2458285 bp Feature: gene Location: 2458976-2463259 bp Ori: QEC03766.1 Feature: domain Description: PRK00566 Location: 2459012-2463101 bp Feature: domain Description: PRK00566 Location: 245901 2-24631 01 bp Feature: gene Location: 2463331-2463522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)