myRT

myRT report for GCA_007975765.1_ASM797576v1

Download annotations/find similar RTs

Seq: CP017504.1 Mannheimia haemolytica strain 32635 chromosome, complete genome (2697513 bp)
Overview 1 RT 1: 1261281-1267051 bp 2 RT 2: 2507048-2516037 bp Neighborhood of RT #1 [1261281, 1267051] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2507048, 2516037] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1261281-1261709 bp Ori: QEB95385.1 Feature: domain Description: rplM Location: 1261284-1261707 bp Feature: domain Description: rplM Location: 1 261 284-1 261 707 bp Feature: gene Location: 1261726-1262121 bp Ori: QEB95386.1 Feature: domain Description: rpsI Location: 1261738-1262119 bp Feature: domain Description: rpsI Location: 1 261 738-1 2621 1 9 bp Feature: gene Location: 1263860-1265523 bp Feature: domain Description: RVT_N Location: 1263872-1264115 bp Feature: domain Description: RVT_N Location: 1 263872-1 2641 1 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264160-1264820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2641 60-1 264820 bp Feature: gene Location: 1265712-1266488 bp Ori: QEB95387.1 Feature: domain Description: YaaA Location: 1265715-1266483 bp Feature: domain Description: YaaA Location: 1 26571 5-1 266483 bp Feature: gene Location: 1266488-1267051 bp Feature: gene Location: 2507048-2508112 bp Ori: QEB96518.1 Feature: domain Description: ECA_wecA Location: 2507060-2508077 bp Feature: domain Description: ECA_wecA Location: 2507060-2508077 bp Feature: gene Location: 2508254-2509534 bp Ori: QEB96519.1 Feature: domain Description: PRK00062 Location: 2508260-2509529 bp Feature: domain Description: PRK00062 Location: 2508260-2509529 bp Feature: gene Location: 2509786-2511096 bp Ori: QEB96520.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2509981-2510800 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2509981 -251 0800 bp Feature: gene Location: 2511491-2515774 bp Ori: QEB96521.1 Feature: domain Description: PRK00566 Location: 2511527-2515616 bp Feature: domain Description: PRK00566 Location: 251 1 527-251 561 6 bp Feature: gene Location: 2515846-2516037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)