myRT

myRT report for GCA_007976245.1_ASM797624v1

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Seq: CP017506.1 Mannheimia haemolytica strain 28488 chromosome, complete genome (2727499 bp)
Overview 1 RT 1: 1478260-1484028 bp 2 RT 2: 2536101-2545090 bp Neighborhood of RT #1 [1478260, 1484030] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2536101, 2545090] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1478260-1478823 bp Feature: gene Location: 1478823-1479599 bp Ori: QEB90300.1 Feature: domain Description: YaaA Location: 1478826-1479594 bp Feature: domain Description: YaaA Location: 1 478826-1 479594 bp Feature: gene Location: 1479788-1481451 bp Feature: domain Description: RVT_N Location: 1479800-1480043 bp Feature: domain Description: RVT_N Location: 1 479800-1 480043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1480088-1480748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 480088-1 480748 bp Feature: gene Location: 1483190-1483585 bp Ori: QEB90301.1 Feature: domain Description: rpsI Location: 1483202-1483583 bp Feature: domain Description: rpsI Location: 1 483202-1 483583 bp Feature: gene Location: 1483602-1484030 bp Ori: QEB90302.1 Feature: domain Description: rplM Location: 1483605-1484028 bp Feature: domain Description: rplM Location: 1 483605-1 484028 bp Feature: gene Location: 2536101-2537165 bp Ori: QEB91306.1 Feature: domain Description: ECA_wecA Location: 2536113-2537130 bp Feature: domain Description: ECA_wecA Location: 25361 1 3-25371 30 bp Feature: gene Location: 2537307-2538587 bp Ori: QEB91307.1 Feature: domain Description: PRK00062 Location: 2537313-2538582 bp Feature: domain Description: PRK00062 Location: 253731 3-2538582 bp Feature: gene Location: 2538839-2540149 bp Ori: QEB91308.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2539034-2539853 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2539034-2539853 bp Feature: gene Location: 2540544-2544827 bp Ori: QEB91309.1 Feature: domain Description: PRK00566 Location: 2540580-2544669 bp Feature: domain Description: PRK00566 Location: 2540580-2544669 bp Feature: gene Location: 2544899-2545090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)