myRT

myRT report for GCA_007978505.1_ASM797850v1

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Seq: CP017519.1 Mannheimia haemolytica strain 22549 chromosome, complete genome (2689760 bp)
Overview 1 RT 1: 1240413-1246823 bp 2 RT 2: 2499415-2508404 bp Neighborhood of RT #1 [1240413, 1246828] rplM rpsI RVT_N RVT-GII HTH_29 rve YaaA Neighborhood of RT #2 [2499415, 2508404] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1240413-1240841 bp Ori: QEB58749.1 Feature: domain Description: rplM Location: 1240416-1240839 bp Feature: domain Description: rplM Location: 1 24041 6-1 240839 bp Feature: gene Location: 1240858-1241253 bp Ori: QEB58750.1 Feature: domain Description: rpsI Location: 1240870-1241251 bp Feature: domain Description: rpsI Location: 1 240870-1 241 251 bp Feature: gene Location: 1242854-1244496 bp Feature: domain Description: RVT_N Location: 1243004-1243247 bp Feature: domain Description: RVT_N Location: 1 243004-1 243247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243292-1243952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 243292-1 243952 bp Feature: gene Location: 1244598-1245638 bp Ori: QEB58751.1 Feature: domain Description: HTH_29 Location: 1244631-1244820 bp Feature: domain Description: HTH_29 Location: 1 244631 -1 244820 bp Feature: domain Description: rve Location: 1245081-1245447 bp Feature: domain Description: rve Location: 1 245081 -1 245447 bp Feature: gene Location: 1246052-1246828 bp Ori: QEB58752.1 Feature: domain Description: YaaA Location: 1246055-1246823 bp Feature: domain Description: YaaA Location: 1 246055-1 246823 bp Feature: gene Location: 2499415-2500479 bp Ori: QEB59903.1 Feature: domain Description: ECA_wecA Location: 2499427-2500444 bp Feature: domain Description: ECA_wecA Location: 2499427-2500444 bp Feature: gene Location: 2500621-2501901 bp Ori: QEB59904.1 Feature: domain Description: PRK00062 Location: 2500627-2501896 bp Feature: domain Description: PRK00062 Location: 2500627-2501 896 bp Feature: gene Location: 2502153-2503463 bp Ori: QEB59905.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2502348-2503167 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2502348-25031 67 bp Feature: gene Location: 2503858-2508141 bp Ori: QEB59906.1 Feature: domain Description: PRK00566 Location: 2503894-2507983 bp Feature: domain Description: PRK00566 Location: 2503894-2507983 bp Feature: gene Location: 2508213-2508404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, HTH_29 (pfam13551), rve (pfam00665), YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2
PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)