myRT

myRT report for GCA_007978725.1_ASM797872v1

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Seq: CP017520.1 Mannheimia haemolytica strain 1609 chromosome, complete genome (2753890 bp)
Overview 1 RT 1: 1431280-1437050 bp 2 RT 2: 2563484-2572473 bp Neighborhood of RT #1 [1431280, 1437050] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2563484, 2572473] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1431280-1431708 bp Ori: QEB56267.1 Feature: domain Description: rplM Location: 1431283-1431706 bp Feature: domain Description: rplM Location: 1 431 283-1 431 706 bp Feature: gene Location: 1431725-1432120 bp Ori: QEB56268.1 Feature: domain Description: rpsI Location: 1431737-1432118 bp Feature: domain Description: rpsI Location: 1 431 737-1 4321 1 8 bp Feature: gene Location: 1433859-1435522 bp Feature: domain Description: RVT_N Location: 1433871-1434114 bp Feature: domain Description: RVT_N Location: 1 433871 -1 4341 1 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1434159-1434819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4341 59-1 43481 9 bp Feature: gene Location: 1435711-1436487 bp Ori: QEB56269.1 Feature: domain Description: YaaA Location: 1435714-1436482 bp Feature: domain Description: YaaA Location: 1 43571 4-1 436482 bp Feature: gene Location: 1436487-1437050 bp Feature: gene Location: 2563484-2564548 bp Ori: QEB57318.1 Feature: domain Description: ECA_wecA Location: 2563496-2564513 bp Feature: domain Description: ECA_wecA Location: 2563496-256451 3 bp Feature: gene Location: 2564690-2565970 bp Ori: QEB57319.1 Feature: domain Description: PRK00062 Location: 2564696-2565965 bp Feature: domain Description: PRK00062 Location: 2564696-2565965 bp Feature: gene Location: 2566222-2567532 bp Ori: QEB57320.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2566417-2567236 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 256641 7-2567236 bp Feature: gene Location: 2567927-2572210 bp Ori: QEB57321.1 Feature: domain Description: PRK00566 Location: 2567963-2572052 bp Feature: domain Description: PRK00566 Location: 2567963-2572052 bp Feature: gene Location: 2572282-2572473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)