myRT

myRT report for GCA_007978905.1_ASM797890v1

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Seq: CP017521.1 Mannheimia haemolytica strain 1584 chromosome, complete genome (2729419 bp)
Overview 1 RT 1: 1513317-1519085 bp 2 RT 2: 2597064-2606053 bp Neighborhood of RT #1 [1513317, 1519087] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2597064, 2606053] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1513317-1513880 bp Feature: gene Location: 1513880-1514656 bp Ori: QEB53690.1 Feature: domain Description: YaaA Location: 1513883-1514651 bp Feature: domain Description: YaaA Location: 1 51 3883-1 51 4651 bp Feature: gene Location: 1514845-1516508 bp Feature: domain Description: RVT_N Location: 1514857-1515100 bp Feature: domain Description: RVT_N Location: 1 51 4857-1 51 51 00 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1515145-1515805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 51 45-1 51 5805 bp Feature: gene Location: 1518247-1518642 bp Ori: QEB53691.1 Feature: domain Description: rpsI Location: 1518259-1518640 bp Feature: domain Description: rpsI Location: 1 51 8259-1 51 8640 bp Feature: gene Location: 1518659-1519087 bp Ori: QEB53692.1 Feature: domain Description: rplM Location: 1518662-1519085 bp Feature: domain Description: rplM Location: 1 51 8662-1 51 9085 bp Feature: gene Location: 2597064-2598128 bp Ori: QEB54703.1 Feature: domain Description: ECA_wecA Location: 2597076-2598093 bp Feature: domain Description: ECA_wecA Location: 2597076-2598093 bp Feature: gene Location: 2598270-2599550 bp Ori: QEB54704.1 Feature: domain Description: PRK00062 Location: 2598276-2599545 bp Feature: domain Description: PRK00062 Location: 2598276-2599545 bp Feature: gene Location: 2599802-2601112 bp Ori: QEB54705.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2599997-2600816 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2599997-260081 6 bp Feature: gene Location: 2601507-2605790 bp Ori: QEB54706.1 Feature: domain Description: PRK00566 Location: 2601543-2605632 bp Feature: domain Description: PRK00566 Location: 2601 543-2605632 bp Feature: gene Location: 2605862-2606053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)