myRT

myRT report for GCA_007979225.1_ASM797922v1

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Seq: CP017523.1 Mannheimia haemolytica strain 1582 chromosome, complete genome (2640172 bp)
Overview 1 RT 1: 1472161-1477929 bp 2 RT 2: 2449824-2458813 bp Neighborhood of RT #1 [1472161, 1477931] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2449824, 2458813] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1472161-1472724 bp Feature: gene Location: 1472724-1473500 bp Ori: QEB48719.1 Feature: domain Description: YaaA Location: 1472727-1473495 bp Feature: domain Description: YaaA Location: 1 472727-1 473495 bp Feature: gene Location: 1473689-1475352 bp Feature: domain Description: RVT_N Location: 1473701-1473944 bp Feature: domain Description: RVT_N Location: 1 473701 -1 473944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1473989-1474649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 473989-1 474649 bp Feature: gene Location: 1477091-1477486 bp Ori: QEB48720.1 Feature: domain Description: rpsI Location: 1477103-1477484 bp Feature: domain Description: rpsI Location: 1 4771 03-1 477484 bp Feature: gene Location: 1477503-1477931 bp Ori: QEB48721.1 Feature: domain Description: rplM Location: 1477506-1477929 bp Feature: domain Description: rplM Location: 1 477506-1 477929 bp Feature: gene Location: 2449824-2450888 bp Ori: QEB49623.1 Feature: domain Description: ECA_wecA Location: 2449836-2450853 bp Feature: domain Description: ECA_wecA Location: 2449836-2450853 bp Feature: gene Location: 2451030-2452310 bp Ori: QEB49624.1 Feature: domain Description: PRK00062 Location: 2451036-2452305 bp Feature: domain Description: PRK00062 Location: 2451 036-2452305 bp Feature: gene Location: 2452562-2453872 bp Ori: QEB49625.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2452757-2453576 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2452757-2453576 bp Feature: gene Location: 2454267-2458550 bp Ori: QEB49626.1 Feature: domain Description: PRK00566 Location: 2454303-2458392 bp Feature: domain Description: PRK00566 Location: 2454303-2458392 bp Feature: gene Location: 2458622-2458813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)