myRT

myRT report for GCA_007979365.1_ASM797936v1

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Seq: CP017524.1 Mannheimia haemolytica strain 1576 chromosome, complete genome (2732072 bp)
Overview 1 RT 1: 1491974-1497742 bp 2 RT 2: 2541682-2550671 bp Neighborhood of RT #1 [1491974, 1497744] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2541682, 2550671] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1491974-1492537 bp Feature: gene Location: 1492537-1493313 bp Ori: QEB46112.1 Feature: domain Description: YaaA Location: 1492540-1493308 bp Feature: domain Description: YaaA Location: 1 492540-1 493308 bp Feature: gene Location: 1493502-1495165 bp Feature: domain Description: RVT_N Location: 1493514-1493757 bp Feature: domain Description: RVT_N Location: 1 49351 4-1 493757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1493802-1494462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 493802-1 494462 bp Feature: gene Location: 1496904-1497299 bp Ori: QEB46113.1 Feature: domain Description: rpsI Location: 1496916-1497297 bp Feature: domain Description: rpsI Location: 1 49691 6-1 497297 bp Feature: gene Location: 1497316-1497744 bp Ori: QEB46114.1 Feature: domain Description: rplM Location: 1497319-1497742 bp Feature: domain Description: rplM Location: 1 49731 9-1 497742 bp Feature: gene Location: 2541682-2542746 bp Ori: QEB47107.1 Feature: domain Description: ECA_wecA Location: 2541694-2542711 bp Feature: domain Description: ECA_wecA Location: 2541 694-254271 1 bp Feature: gene Location: 2542888-2544168 bp Ori: QEB47108.1 Feature: domain Description: PRK00062 Location: 2542894-2544163 bp Feature: domain Description: PRK00062 Location: 2542894-25441 63 bp Feature: gene Location: 2544420-2545730 bp Ori: QEB47109.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2544615-2545434 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 254461 5-2545434 bp Feature: gene Location: 2546125-2550408 bp Ori: QEB47110.1 Feature: domain Description: PRK00566 Location: 2546161-2550250 bp Feature: domain Description: PRK00566 Location: 25461 61 -2550250 bp Feature: gene Location: 2550480-2550671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)