myRT

myRT report for GCA_007979905.1_ASM797990v1

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Seq: CP017527.1 Mannheimia haemolytica strain 1563 chromosome, complete genome (2683719 bp)
Overview 1 RT 1: 1382754-1388524 bp 2 RT 2: 2550336-2559325 bp Neighborhood of RT #1 [1382754, 1388524] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2550336, 2559325] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1382754-1383182 bp Ori: QEB38602.1 Feature: domain Description: rplM Location: 1382757-1383180 bp Feature: domain Description: rplM Location: 1 382757-1 3831 80 bp Feature: gene Location: 1383199-1383594 bp Ori: QEB38603.1 Feature: domain Description: rpsI Location: 1383211-1383592 bp Feature: domain Description: rpsI Location: 1 38321 1 -1 383592 bp Feature: gene Location: 1385333-1386996 bp Feature: domain Description: RVT_N Location: 1385345-1385588 bp Feature: domain Description: RVT_N Location: 1 385345-1 385588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1385633-1386293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 385633-1 386293 bp Feature: gene Location: 1387185-1387961 bp Ori: QEB38604.1 Feature: domain Description: YaaA Location: 1387188-1387956 bp Feature: domain Description: YaaA Location: 1 3871 88-1 387956 bp Feature: gene Location: 1387961-1388524 bp Feature: gene Location: 2550336-2551400 bp Ori: QEB39676.1 Feature: domain Description: ECA_wecA Location: 2550348-2551365 bp Feature: domain Description: ECA_wecA Location: 2550348-2551 365 bp Feature: gene Location: 2551542-2552822 bp Ori: QEB39677.1 Feature: domain Description: PRK00062 Location: 2551548-2552817 bp Feature: domain Description: PRK00062 Location: 2551 548-255281 7 bp Feature: gene Location: 2553074-2554384 bp Ori: QEB39678.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2553269-2554088 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2553269-2554088 bp Feature: gene Location: 2554779-2559062 bp Ori: QEB39679.1 Feature: domain Description: PRK00566 Location: 2554815-2558904 bp Feature: domain Description: PRK00566 Location: 255481 5-2558904 bp Feature: gene Location: 2559134-2559325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)