myRT

myRT report for GCA_007980045.1_ASM798004v1

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Seq: CP017528.1 Mannheimia haemolytica strain 1561 chromosome, complete genome (2682488 bp)
Overview 1 RT 1: 1482156-1487924 bp 2 RT 2: 2492047-2501036 bp Neighborhood of RT #1 [1482156, 1487926] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2492047, 2501036] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1482156-1482719 bp Feature: gene Location: 1482719-1483495 bp Ori: QEB36109.1 Feature: domain Description: YaaA Location: 1482722-1483490 bp Feature: domain Description: YaaA Location: 1 482722-1 483490 bp Feature: gene Location: 1483684-1485347 bp Feature: domain Description: RVT_N Location: 1483696-1483939 bp Feature: domain Description: RVT_N Location: 1 483696-1 483939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1483984-1484644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 483984-1 484644 bp Feature: gene Location: 1487086-1487481 bp Ori: QEB36110.1 Feature: domain Description: rpsI Location: 1487098-1487479 bp Feature: domain Description: rpsI Location: 1 487098-1 487479 bp Feature: gene Location: 1487498-1487926 bp Ori: QEB36111.1 Feature: domain Description: rplM Location: 1487501-1487924 bp Feature: domain Description: rplM Location: 1 487501 -1 487924 bp Feature: gene Location: 2492047-2493111 bp Ori: QEB37057.1 Feature: domain Description: ECA_wecA Location: 2492059-2493076 bp Feature: domain Description: ECA_wecA Location: 2492059-2493076 bp Feature: gene Location: 2493253-2494533 bp Ori: QEB37058.1 Feature: domain Description: PRK00062 Location: 2493259-2494528 bp Feature: domain Description: PRK00062 Location: 2493259-2494528 bp Feature: gene Location: 2494785-2496095 bp Ori: QEB37059.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2494980-2495799 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2494980-2495799 bp Feature: gene Location: 2496490-2500773 bp Ori: QEB37060.1 Feature: domain Description: PRK00566 Location: 2496526-2500615 bp Feature: domain Description: PRK00566 Location: 2496526-250061 5 bp Feature: gene Location: 2500845-2501036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)