myRT

myRT report for GCA_007980145.1_ASM798014v1

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Seq: CP017529.1 Mannheimia haemolytica strain 1560 chromosome, complete genome (2661933 bp)
Overview 1 RT 1: 1482805-1488573 bp 2 RT 2: 2470614-2479603 bp Neighborhood of RT #1 [1482805, 1488575] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2470614, 2479603] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1482805-1483368 bp Feature: gene Location: 1483368-1484144 bp Ori: QEB33567.1 Feature: domain Description: YaaA Location: 1483371-1484139 bp Feature: domain Description: YaaA Location: 1 483371 -1 4841 39 bp Feature: gene Location: 1484333-1485996 bp Feature: domain Description: RVT_N Location: 1484345-1484588 bp Feature: domain Description: RVT_N Location: 1 484345-1 484588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1484633-1485293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 484633-1 485293 bp Feature: gene Location: 1487735-1488130 bp Ori: QEB33568.1 Feature: domain Description: rpsI Location: 1487747-1488128 bp Feature: domain Description: rpsI Location: 1 487747-1 4881 28 bp Feature: gene Location: 1488147-1488575 bp Ori: QEB33569.1 Feature: domain Description: rplM Location: 1488150-1488573 bp Feature: domain Description: rplM Location: 1 4881 50-1 488573 bp Feature: gene Location: 2470614-2471678 bp Ori: QEB34481.1 Feature: domain Description: ECA_wecA Location: 2470626-2471643 bp Feature: domain Description: ECA_wecA Location: 2470626-2471 643 bp Feature: gene Location: 2471820-2473100 bp Ori: QEB34482.1 Feature: domain Description: PRK00062 Location: 2471826-2473095 bp Feature: domain Description: PRK00062 Location: 2471 826-2473095 bp Feature: gene Location: 2473352-2474662 bp Ori: QEB34483.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2473547-2474366 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2473547-2474366 bp Feature: gene Location: 2475057-2479340 bp Ori: QEB34484.1 Feature: domain Description: PRK00566 Location: 2475093-2479182 bp Feature: domain Description: PRK00566 Location: 2475093-24791 82 bp Feature: gene Location: 2479412-2479603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)