myRT

myRT report for GCA_007980285.1_ASM798028v1

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Seq: CP017530.1 Mannheimia haemolytica strain 1532 chromosome, complete genome (2644838 bp)
Overview 1 RT 1: 1499713-1505480 bp 2 RT 2: 2454604-2463593 bp Neighborhood of RT #1 [1499713, 1505482] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2454604, 2463593] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1499713-1500276 bp Feature: gene Location: 1500276-1501052 bp Ori: QEB31046.1 Feature: domain Description: YaaA Location: 1500279-1501047 bp Feature: domain Description: YaaA Location: 1 500279-1 501 047 bp Feature: gene Location: 1501241-1502904 bp Feature: domain Description: RVT_N Location: 1501253-1501496 bp Feature: domain Description: RVT_N Location: 1 501 253-1 501 496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501541-1502201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 541 -1 502201 bp Feature: gene Location: 1504642-1505037 bp Ori: QEB31047.1 Feature: domain Description: rpsI Location: 1504654-1505035 bp Feature: domain Description: rpsI Location: 1 504654-1 505035 bp Feature: gene Location: 1505054-1505482 bp Ori: QEB31048.1 Feature: domain Description: rplM Location: 1505057-1505480 bp Feature: domain Description: rplM Location: 1 505057-1 505480 bp Feature: gene Location: 2454604-2455668 bp Ori: QEB31935.1 Feature: domain Description: ECA_wecA Location: 2454616-2455633 bp Feature: domain Description: ECA_wecA Location: 245461 6-2455633 bp Feature: gene Location: 2455810-2457090 bp Ori: QEB31936.1 Feature: domain Description: PRK00062 Location: 2455816-2457085 bp Feature: domain Description: PRK00062 Location: 245581 6-2457085 bp Feature: gene Location: 2457342-2458652 bp Ori: QEB31937.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457537-2458356 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2457537-2458356 bp Feature: gene Location: 2459047-2463330 bp Ori: QEB31938.1 Feature: domain Description: PRK00566 Location: 2459083-2463172 bp Feature: domain Description: PRK00566 Location: 2459083-24631 72 bp Feature: gene Location: 2463402-2463593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)