myRT

myRT report for GCA_007980445.1_ASM798044v1

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Seq: CP017531.1 Mannheimia haemolytica strain 1514 chromosome, complete genome (2678163 bp)
Overview 1 RT 1: 471604-477372 bp 2 RT 2: 1448326-1457315 bp Neighborhood of RT #1 [471604, 477374] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [1448326, 1457315] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 471604-472167 bp Feature: gene Location: 472167-472943 bp Ori: QEB27531.1 Feature: domain Description: YaaA Location: 472170-472938 bp Feature: domain Description: YaaA Location: 4721 70-472938 bp Feature: gene Location: 473132-474795 bp Feature: domain Description: RVT_N Location: 473144-473387 bp Feature: domain Description: RVT_N Location: 4731 44-473387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473432-474092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473432-474092 bp Feature: gene Location: 476534-476929 bp Ori: QEB27532.1 Feature: domain Description: rpsI Location: 476546-476927 bp Feature: domain Description: rpsI Location: 476546-476927 bp Feature: gene Location: 476946-477374 bp Ori: QEB27533.1 Feature: domain Description: rplM Location: 476949-477372 bp Feature: domain Description: rplM Location: 476949-477372 bp Feature: gene Location: 1448326-1449390 bp Ori: QEB28455.1 Feature: domain Description: ECA_wecA Location: 1448338-1449355 bp Feature: domain Description: ECA_wecA Location: 1 448338-1 449355 bp Feature: gene Location: 1449532-1450812 bp Ori: QEB28456.1 Feature: domain Description: PRK00062 Location: 1449538-1450807 bp Feature: domain Description: PRK00062 Location: 1 449538-1 450807 bp Feature: gene Location: 1451064-1452374 bp Ori: QEB28457.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1451259-1452078 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 451 259-1 452078 bp Feature: gene Location: 1452769-1457052 bp Ori: QEB28458.1 Feature: domain Description: PRK00566 Location: 1452805-1456894 bp Feature: domain Description: PRK00566 Location: 1 452805-1 456894 bp Feature: gene Location: 1457124-1457315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)