myRT

myRT report for GCA_007980985.1_ASM798098v1

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Seq: CP017536.1 Mannheimia haemolytica strain 1476, complete genome (2739171 bp)
Overview 1 RT 1: 1366816-1372584 bp 2 RT 2: 2548682-2557671 bp Neighborhood of RT #1 [1366816, 1372586] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2548682, 2557671] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1366816-1367379 bp Feature: gene Location: 1367379-1368155 bp Ori: QEB15278.1 Feature: domain Description: YaaA Location: 1367382-1368150 bp Feature: domain Description: YaaA Location: 1 367382-1 3681 50 bp Feature: gene Location: 1368344-1370007 bp Feature: domain Description: RVT_N Location: 1368356-1368599 bp Feature: domain Description: RVT_N Location: 1 368356-1 368599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368644-1369304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 368644-1 369304 bp Feature: gene Location: 1371746-1372141 bp Ori: QEB15279.1 Feature: domain Description: rpsI Location: 1371758-1372139 bp Feature: domain Description: rpsI Location: 1 371 758-1 3721 39 bp Feature: gene Location: 1372158-1372586 bp Ori: QEB15280.1 Feature: domain Description: rplM Location: 1372161-1372584 bp Feature: domain Description: rplM Location: 1 3721 61 -1 372584 bp Feature: gene Location: 2548682-2549746 bp Ori: QEB16367.1 Feature: domain Description: ECA_wecA Location: 2548694-2549711 bp Feature: domain Description: ECA_wecA Location: 2548694-254971 1 bp Feature: gene Location: 2549888-2551168 bp Ori: QEB16368.1 Feature: domain Description: PRK00062 Location: 2549894-2551163 bp Feature: domain Description: PRK00062 Location: 2549894-2551 1 63 bp Feature: gene Location: 2551420-2552730 bp Ori: QEB16369.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2551615-2552434 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2551 61 5-2552434 bp Feature: gene Location: 2553125-2557408 bp Ori: QEB16370.1 Feature: domain Description: PRK00566 Location: 2553161-2557250 bp Feature: domain Description: PRK00566 Location: 25531 61 -2557250 bp Feature: gene Location: 2557480-2557671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)