myRT

myRT report for GCA_007981005.1_ASM798100v1

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Seq: CP017537.1 Mannheimia haemolytica strain 1475, complete genome (2699449 bp)
Overview 1 RT 1: 1245788-1251558 bp 2 RT 2: 2509018-2518007 bp Neighborhood of RT #1 [1245788, 1251558] rplM rpsI RVT_N RVT-GII YaaA Neighborhood of RT #2 [2509018, 2518007] ECA_wecA PRK00062 RVT-UG2 PRK00566 Feature: gene Location: 1245788-1246216 bp Ori: QEB12586.1 Feature: domain Description: rplM Location: 1245791-1246214 bp Feature: domain Description: rplM Location: 1 245791 -1 24621 4 bp Feature: gene Location: 1246233-1246628 bp Ori: QEB12587.1 Feature: domain Description: rpsI Location: 1246245-1246626 bp Feature: domain Description: rpsI Location: 1 246245-1 246626 bp Feature: gene Location: 1248367-1250030 bp Feature: domain Description: RVT_N Location: 1248379-1248622 bp Feature: domain Description: RVT_N Location: 1 248379-1 248622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248667-1249327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 248667-1 249327 bp Feature: gene Location: 1250219-1250995 bp Ori: QEB12588.1 Feature: domain Description: YaaA Location: 1250222-1250990 bp Feature: domain Description: YaaA Location: 1 250222-1 250990 bp Feature: gene Location: 1250995-1251558 bp Feature: gene Location: 2509018-2510082 bp Ori: QEB13745.1 Feature: domain Description: ECA_wecA Location: 2509030-2510047 bp Feature: domain Description: ECA_wecA Location: 2509030-251 0047 bp Feature: gene Location: 2510224-2511504 bp Ori: QEB13746.1 Feature: domain Description: PRK00062 Location: 2510230-2511499 bp Feature: domain Description: PRK00062 Location: 251 0230-251 1 499 bp Feature: gene Location: 2511756-2513066 bp Ori: QEB13747.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2511951-2512770 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 251 1 951 -251 2770 bp Feature: gene Location: 2513461-2517744 bp Ori: QEB13748.1 Feature: domain Description: PRK00566 Location: 2513497-2517586 bp Feature: domain Description: PRK00566 Location: 251 3497-251 7586 bp Feature: gene Location: 2517816-2518007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, YaaA (COG3022), ECA_wecA (TIGR02380), PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional)