myRT

myRT report for GCA_007981045.1_ASM798104v1

Download annotations/find similar RTs

Seq: CP017539.1 Mannheimia haemolytica strain 1454, complete genome (2746224 bp)
Overview 1 RT 1: 499069-504837 bp 2 RT 2: 2183839-2192793 bp Neighborhood of RT #1 [499069, 504839] YaaA RVT_N RVT-GII rpsI rplM Neighborhood of RT #2 [2183839, 2192828] PRK00566 RVT-UG2 PRK00062 ECA_wecA Feature: gene Location: 499069-499632 bp Feature: gene Location: 499632-500408 bp Ori: QEB06494.1 Feature: domain Description: YaaA Location: 499635-500403 bp Feature: domain Description: YaaA Location: 499635-500403 bp Feature: gene Location: 500597-502260 bp Feature: domain Description: RVT_N Location: 500609-500852 bp Feature: domain Description: RVT_N Location: 500609-500852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500897-501557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500897-501 557 bp Feature: gene Location: 503999-504394 bp Ori: QEB06495.1 Feature: domain Description: rpsI Location: 504011-504392 bp Feature: domain Description: rpsI Location: 50401 1 -504392 bp Feature: gene Location: 504411-504839 bp Ori: QEB06496.1 Feature: domain Description: rplM Location: 504414-504837 bp Feature: domain Description: rplM Location: 50441 4-504837 bp Feature: gene Location: 2183839-2184030 bp Feature: gene Location: 2184102-2188385 bp Ori: QEB08071.1 Feature: domain Description: PRK00566 Location: 2184138-2188227 bp Feature: domain Description: PRK00566 Location: 21 841 38-21 88227 bp Feature: gene Location: 2188780-2190090 bp Ori: QEB08072.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2188975-2189794 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 21 88975-21 89794 bp Feature: gene Location: 2190342-2191622 bp Ori: QEB08073.1 Feature: domain Description: PRK00062 Location: 2190348-2191617 bp Feature: domain Description: PRK00062 Location: 21 90348-21 91 61 7 bp Feature: gene Location: 2191764-2192828 bp Ori: QEB08074.1 Feature: domain Description: ECA_wecA Location: 2191776-2192793 bp Feature: domain Description: ECA_wecA Location: 21 91 776-21 92793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YaaA (COG3022), RVT_N (pfam13655), RVT-GII, rpsI (PRK00132), rplM (PRK09216), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), ECA_wecA (TIGR02380)